ebf3a (Oryzias latipes)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) ENSORLG00000005870 T174649_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.952 0.952
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.918 0.918
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.918 0.918
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.918 0.918
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.870 0.870
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.866 0.866
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.861 0.861
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.732 0.732
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000007387 EBF1 16 246

Links

Other EBF1 family TFs
Other Oryzias latipes TFs

341 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_02846 Capronia coronata A1O1_02846 I
A1O3_05489 Capronia epimyces A1O3_05489 I
A1O5_01678 Cladophialophora psammophila A1O5_01678 I
A1O7_08460 Cladophialophora yegresii A1O7_08460 I
A1O9_10802 Exophiala aquamarina A1O9_10802 I
ACLA_089160 Aspergillus clavatus CADACLAG00008330 I
AFUA_2G05540 Aspergillus fumigatus CADAFUAG00003737 I
ANIA_10944 Aspergillus nidulans CADANIAG00000590 I
AOL_s00004g557 Arthrobotrys oligospora AOL_s00004g557 I
ARB_03882 Arthroderma benhamiae ARB_03882 I
AUEXF2481DRAFT_65435 Aureobasidium subglaciale AUEXF2481DRAFT_65435 I
AWRI1499_4038 Brettanomyces bruxellensis AWRI1499_4038 N
BBA_00468 Beauveria bassiana BBA_00468 I
Bcin12g04450 Botrytis cinerea Bcin12g04450 I
BDDG_07753 Blastomyces dermatitidis BDDG_07753 I
BGHDH14_bgh00967 Blumeria graminis BGHDH14_bgh00967 I
BN7_563 Wickerhamomyces ciferrii BN7_563 N
CADAFLAG00010027 Aspergillus flavus CADAFLAG00010027 I
CADANGAG00002914 Aspergillus niger CADANGAG00002914 I
CADAORAG00000607 Aspergillus oryzae CADAORAG00000607 I
CANTEDRAFT_127944 Candida tenuis CANTEDRAFT_127944 N
CaO19.12262 Candida albicans CaO19.12262 N
CaO19.4799 Candida albicans CaO19.4799 N
CD36_08840 Candida dubliniensis CD36_08840 N
CFIO01_09112 Colletotrichum fioriniae CFIO01_09112 I
CH063_10094 Colletotrichum higginsianum CH063_10094 I
CIMG_00756 Coccidioides immitis CIMG_00756 I
CLUG_01728 Clavispora lusitaniae CLUG_01728 N
Cob_08277 Colletotrichum orbiculare Cob_08277 I
CPC735_055380 Coccidioides posadasii CPC735_055380 I
CPUR_07562 Claviceps purpurea CPUR_07562 I
CSUB01_10821 Colletotrichum sublineola CSUB01_10821 I
CTHT_0038140 Chaetomium thermophilum CTHT_0038140 I
CTRG_03423 Candida tropicalis CTRG_03423 N
DOTSEDRAFT_74195 Dothistroma septosporum DOTSEDRAFT_74195 I
DRE_01864 Drechslerella stenobrocha DRE_01864 I
ENSCING00000007995 Ciona intestinalis ENSCING00000007995 I
ENSCSAVG00000010518 Ciona savignyi ENSCSAVG00000010518 I
EPUS_01985 Endocarpon pusillum EPUS_01985 I
estExt_Genewise1.C_90338 Tremella mesenterica estExt_Genewise1.C_90338 I
estExt_Genewise1Plus.C_120553 Neurospora discreta estExt_Genewise1Plus.C_120553 I
estExt_Genewise1Plus.C_chr_91101 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_91101 I
EURHEDRAFT_516515 Aspergillus ruber EURHEDRAFT_516515 I
EV44_g0995 Erysiphe necator EV44_g0995 I
e_gw1.3.1350.1 Cryphonectria parasitica e_gw1.3.1350.1 I
e_gw1.3.682.1 Mycosphaerella fijiensis e_gw1.3.682.1 I
fgenesh1_pg.00082_#_74 Aspergillus carbonarius fgenesh1_pg.00082_#_74 I
fgenesh1_pm.C_chr_2.1000495 Pichia stipitis fgenesh1_pm.C_chr_2.1000495 I
G647_07436 Cladophialophora carrionii G647_07436 I
GGTG_08551 Gaeumannomyces graminis GGTG_08551 I
GLRG_05830 Colletotrichum graminicola GLRG_05830 I
GNLVRS01_PISO0K09822g Millerozyma farinosa GNLVRS01_PISO0K09822g N
GNLVRS01_PISO0L09823g Millerozyma farinosa GNLVRS01_PISO0L09823g N
GSTUM_00010646001 Tuber melanosporum GSTUM_00010646001 I
H072_8200 Dactylellina haptotyla H072_8200 I
H101_03635 Trichophyton interdigitale H101_03635 I
H102_03654 Trichophyton rubrum H102_03654 I
H105_03678 Trichophyton soudanense H105_03678 I
HCBG_04967 Histoplasma capsulatum HCBG_04967 I
HMPREF1120_07299 Exophiala dermatitidis HMPREF1120_07299 I
HMPREF1541_03851 Cyphellophora europaea HMPREF1541_03851 I
HPODL_01903 Ogataea parapolymorpha HPODL_01903 N
KUCA_T00004403001 Kuraishia capsulata KUCA_T00004403001 N
M437DRAFT_72008 Aureobasidium melanogenum M437DRAFT_72008 I
M438DRAFT_340897 Aureobasidium pullulans M438DRAFT_340897 I
MBM_00810 Marssonina brunnea MBM_00810 I
MCYG_03548 Microsporum canis MCYG_03548 I
MCYG_03548 Arthroderma otae MCYG_03548 I
MGG_01426 Magnaporthe oryzae MGG_01426 I
MGYG_09009 Microsporum gypseum MGYG_09009 I
MPH_03356 Macrophomina phaseolina MPH_03356 I
MYCFIDRAFT_30809 Pseudocercospora fijiensis MYCFIDRAFT_30809 I
Mycgr3G75916 Zymoseptoria tritici Mycgr3G75916 I
MYCTH_2309965 Myceliophthora thermophila MYCTH_2309965 I
NCU06994 Neurospora crassa NCU06994 I
NEUTE1DRAFT_129045 Neurospora tetrasperma NEUTE1DRAFT_129045 I
NFIA_082260 Neosartorya fischeri CADNFIAG00008579 I
OIDMADRAFT_199866 Oidiodendron maius OIDMADRAFT_199866 I
PAAG_02262 Paracoccidioides sp lutzii PAAG_02262 I
PABG_04769 Paracoccidioides brasiliensis PABG_04769 I
PAS_chr1-3_0182 Komagataella pastoris PAS_chr1-3_0182 N
Pc22g08680 Penicillium chrysogenum Pc22g08680 I
PCH_Pc22g08680 Penicillium rubens PCH_Pc22g08680 I
PDE_06927 Penicillium oxalicum PDE_06927 I
PDIP_87140 Penicillium digitatum PDIP_87140 I
PEX1_059060 Penicillium expansum PEX1_059060 I
PFICI_04624 Pestalotiopsis fici PFICI_04624 I
PICST_35246 Scheffersomyces stipitis PICST_35246 I
PITC_008110 Penicillium italicum PITC_008110 I
PMAA_071590 Talaromyces marneffei PMAA_071590 I
PMAA_071590 Penicillium marneffei PMAA_071590 I
PODANS_1_23660 Podospora anserina PODANS_1_23660 I
PV04_09010 Capronia semiimmersa PV04_09010 I
PV05_00825 Exophiala xenobiotica PV05_00825 I
PV07_00744 Cladophialophora immunda PV07_00744 I
PV10_04605 Exophiala mesophila PV10_04605 I
PV11_02370 Exophiala sideris PV11_02370 I
SBOR_1907 Sclerotinia borealis SBOR_1907 I
SEPMUDRAFT_151351 Sphaerulina musiva SEPMUDRAFT_151351 I
SNAPOd2T00000694001 Oikopleura dioica SNAPOd2T00000694001 I
SPAPADRAFT_68188 Spathaspora passalidarum SPAPADRAFT_68188 N
SS1G_08625 Sclerotinia sclerotiorum SS1G_08625 I
TEQG_01269 Trichophyton equinum TEQG_01269 I
TESG_05422 Trichophyton tonsurans TESG_05422 I
THITE_2122671 Thielavia terrestris THITE_2122671 I
TRIATDRAFT_33700 Trichoderma atroviride TRIATDRAFT_33700 I
TRV_06629 Trichophyton verrucosum TRV_06629 I
TSTA_092120 Talaromyces stipitatus TSTA_092120 I
U727_0043359201 Penicillium solitum U727_0043359201 I
UCRNP2_1337 Neofusicoccum parvum UCRNP2_1337 I
UCRPA7_1346 Togninia minima UCRPA7_1346 I
UREG_00734 Uncinocarpus reesii UREG_00734 I
VDAG_10253 Verticillium dahliae VDAG_10253 I
VDBG_08274 Verticillium albo atrum VDBG_08274 I
VDBG_08274 Verticillium alfalfae VDBG_08274 I
W97_00500 Coniosporium apollinis W97_00500 I
XP_002489526.1 Pichia pastoris XP_002489526.1 N
Z517_05287 Fonsecaea pedrosoi Z517_05287 I
Z518_05159 Rhinocladiella mackenziei Z518_05159 I
Z519_01738 Cladophialophora bantiana Z519_01738 I