CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LotgiG172065
(
Lottia gigantea
)
Ets
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00178 (Ets)
IPR000418
LotgiG172065
T177447_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ELF1
M02971_2.00
Homo sapiens
DACCCGGAAGTV
BACTTCCGGGTH
SELEX
Jolma et al.(2013)
ELF1_1
0.800
0.450
ELF1
M02972_2.00
Homo sapiens
WACCCGGAAGTR
YACTTCCGGGTW
SELEX
Jolma et al.(2013)
ELF1_2
0.800
0.450
ELF1
M04740_2.00
Homo sapiens
NWHSCGGAAGYN
NRCTTCCGSDWN
SELEX
Yin et al.(2017)
ELF1_eDBD_HT-SELEX_1
0.800
0.450
ELF1
M04741_2.00
Homo sapiens
NDBVCGGAAGTN
NACTTCCGBVHN
SELEX
Yin et al.(2017)
ELF1_eDBD_HT-SELEX_2
0.800
0.450
ELF1
M04744_2.00
Homo sapiens
NWHSCGGAAGYN
NRCTTCCGSDWN
SELEX
Yin et al.(2017)
ELF1_FL_HT-SELEX_1
0.800
0.450
ELF1
M04745_2.00
Homo sapiens
DWBVCGGAAGTD
HACTTCCGBVWH
SELEX
Yin et al.(2017)
ELF1_FL_HT-SELEX_2
0.800
0.450
ELF1
M07947_2.00
Homo sapiens
VVVDSSCGGAAGYSS
SSRCTTCCGSSHBBB
ChIP-seq
Gerstein et al.(2012)
GM12878_ELF1_HudsonAlpha
0.800
0.450
ELF1
M07948_2.00
Homo sapiens
NVDVSCGGAAGYVV
BBRCTTCCGSBHBN
ChIP-seq
Gerstein et al.(2012)
HepG2_ELF1_HudsonAlpha
0.800
0.450
ELF1
M07949_2.00
Homo sapiens
DVSCGGAAGYG
CRCTTCCGSBH
ChIP-seq
Gerstein et al.(2012)
K562_ELF1_HudsonAlpha
0.800
0.450
ELF1
M08198_2.00
Homo sapiens
WCCCGGAAGY
RCTTCCGGGW
ChIP-seq
Contrino et al.(2012)
Mv63
0.800
0.450
ELF1
M09050_2.00
Homo sapiens
VVWNSMGGAAGYVS
SBRCTTCCKSNWBB
Misc
Kulakovskiy et al.(2013)
ELF1_HUMAN.H11MO.0.A
0.800
0.450
Elf1
M09079_2.00
Mus musculus
VVDVSCGGAAGYVV
BBRCTTCCGSBHBB
Misc
Kulakovskiy et al.(2013)
ELF1_MOUSE.H11MO.0.A
0.800
0.450
ELF1
M09529_2.00
Homo sapiens
NVCCGGAAGY
RCTTCCGGBN
Misc
Heinz et al.(2010)
Jurkat-ELF1_SRA014231
0.800
0.450
ELF1
M10483_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ELF1_03
0.800
0.450
ELF1
M10484_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ELF1_07
0.800
0.450
ELF1
M10485_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ELF1_Q4
0.800
0.450
ELF1
M10486_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ELF1_Q5
0.800
0.450
ELF1
M10487_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ELF1_Q6
0.800
0.450
ELF1
M04742_2.00
Homo sapiens
NWNSMGGAAGTR
YACTTCCKSNWN
SELEX
Yin et al.(2017)
ELF1_eDBD_Methyl-HT-SELEX_1
0.800
0.450
ELF1
M04743_2.00
Homo sapiens
DDNVMGGAAGTR
YACTTCCKBNHH
SELEX
Yin et al.(2017)
ELF1_eDBD_Methyl-HT-SELEX_2
0.800
0.450
ELF1
M04746_2.00
Homo sapiens
NWHCMGGAAGTN
NACTTCCKGDWN
SELEX
Yin et al.(2017)
ELF1_FL_Methyl-HT-SELEX_1
0.800
0.450
ELF1
M04747_2.00
Homo sapiens
DABSCGGAAGTR
YACTTCCGSVTH
SELEX
Yin et al.(2017)
ELF1_FL_Methyl-HT-SELEX_2
0.800
0.450
Elf4
M01492_2.00
Mus musculus
NNVMGGAAVH
DBTTCCKBNN
PBM
Wei et al.(2010)
Elf4
0.800
0.425
ELF4
M02966_2.00
Homo sapiens
DACCCGGAAGTR
YACTTCCGGGTH
SELEX
Jolma et al.(2013)
ELF4_1
0.800
0.425
ELF4
M04716_2.00
Homo sapiens
NWHSCGGAAGTN
NACTTCCGSDWN
SELEX
Yin et al.(2017)
ELF4_eDBD_HT-SELEX_1
0.800
0.425
ELF4
M04717_2.00
Homo sapiens
NABSCGGAAGTR
YACTTCCGSVTN
SELEX
Yin et al.(2017)
ELF4_eDBD_HT-SELEX_2
0.800
0.425
ELF4
M04718_2.00
Homo sapiens
NAHCMGGAAGTR
YACTTCCKGDTN
SELEX
Yin et al.(2017)
ELF4_eDBD_Methyl-HT-SELEX_1
0.800
0.425
ELF4
M04719_2.00
Homo sapiens
NANVMGGAAGTD
HACTTCCKBNTN
SELEX
Yin et al.(2017)
ELF4_eDBD_Methyl-HT-SELEX_2
0.800
0.425
Elf2
M01494_2.00
Mus musculus
NNVMGGAAVH
DBTTCCKBNN
PBM
Wei et al.(2010)
Elf2
0.757
0.425
Eip74EF
M03723_2.00
Drosophila melanogaster
WACCCGGAAGTR
YACTTCCGGGTW
SELEX
Nitta et al.(2015)
Eip74EF_1
0.757
0.425
Eip74EF
M03724_2.00
Drosophila melanogaster
WABSCGGAAGTR
YACTTCCGSVTW
SELEX
Nitta et al.(2015)
Eip74EF_2
0.757
0.425
ELF2
M04722_2.00
Homo sapiens
NWHSCGGAAGTN
NACTTCCGSDWN
SELEX
Yin et al.(2017)
ELF2_eDBD_HT-SELEX_1
0.757
0.425
ELF2
M04723_2.00
Homo sapiens
DRBSCGGAAGTD
HACTTCCGSVYH
SELEX
Yin et al.(2017)
ELF2_eDBD_HT-SELEX_2
0.757
0.425
ELF2
M04726_2.00
Homo sapiens
NAMCCGGAAGTV
BACTTCCGGKTN
SELEX
Yin et al.(2017)
ELF2_FL_HT-SELEX_1
0.757
0.425
ELF2
M04727_2.00
Homo sapiens
DAYSCGGAAGTR
YACTTCCGSRTH
SELEX
Yin et al.(2017)
ELF2_FL_HT-SELEX_2
0.757
0.425
Eip74EF
M06186_2.00
Drosophila melanogaster
WHMAGGAAKT
AMTTCCTKDW
B1H
Zhu et al.(2011)
Eip74EF_FlyReg_FBgn0000567
0.757
0.425
Eip74EF
M06187_2.00
Drosophila melanogaster
ACCCGGAAGT
ACTTCCGGGT
B1H
Zhu et al.(2011)
Eip74EF_SANGER_5_FBgn0000567
0.757
0.425
Eip74EF
M02679_2.00
Drosophila melanogaster
CMGGAAR
YTTCCKG
SELEX
Mathelier et al.(2014)
MA0026.1
0.757
0.425
ELF2
M09049_2.00
Homo sapiens
NDVSCGGAAGYVV
BBRCTTCCGSBHN
Misc
Kulakovskiy et al.(2013)
ELF2_HUMAN.H11MO.0.C
0.757
0.425
Elf2
M09080_2.00
Mus musculus
YDNCAGGAAGBRRVK
MBYYVCTTCCTGNHR
Misc
Kulakovskiy et al.(2013)
ELF2_MOUSE.H11MO.0.C
0.757
0.425
Eip74EF
M09667_2.00
Drosophila melanogaster
VWHMMGGAART
AYTTCCKKDWB
Misc
Kulakovskiy et al.(2009)
Eip74EF
0.757
0.425
Eip74EF
M10521_2.00
Drosophila melanogaster
NNAAYCMGGAARTNNDV
BHNNAYTTCCKGRWTNN
Transfac
Matys et al.(2006)
I$E74A_01
0.757
0.425
ELF2
M10480_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NERF_Q2
0.757
0.425
ELF2
M04724_2.00
Homo sapiens
NWHCMGGAAGTR
YACTTCCKGDWN
SELEX
Yin et al.(2017)
ELF2_eDBD_Methyl-HT-SELEX_1
0.757
0.425
ELF2
M04725_2.00
Homo sapiens
DANVCGGAAGTD
HACTTCCGBNTH
SELEX
Yin et al.(2017)
ELF2_eDBD_Methyl-HT-SELEX_2
0.757
0.425
ELF2
M04728_2.00
Homo sapiens
AAMCMGGAAGTR
YACTTCCKGKTT
SELEX
Yin et al.(2017)
ELF2_FL_Methyl-HT-SELEX_1
0.757
0.425
ELF2
M04729_2.00
Homo sapiens
RAYSMGGAAGTR
YACTTCCKSRTT
SELEX
Yin et al.(2017)
ELF2_FL_Methyl-HT-SELEX_2
0.757
0.425
For this family, TFs with SR scores >
0.717
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP172065
Ets
188
267
LLWKFILETLKDKNQKLISWQDEREGTFKFDDTVAFSRRWGAKKGKNDMNFEKLSRAIRHYYKNGLMSRISTERLVYKFN
Links
Other
Ets
family TFs
Other
Lottia gigantea
TFs
333 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG011191.1
Alligator sinensis
Alligator_sinensis_CCG011191.1
N
ENSAPLG00000010349
Anas platyrhynchos
ENSAPLG00000010349
N
ENSFALG00000009766
Ficedula albicollis
ENSFALG00000009766
N
ENSGALG00000002852
Gallus gallus
ENSGALG00000002852
N
ENSMMUG00000001245
Macaca mulatta
ENSMMUG00000001245
N
ENSMPUG00000016477
Mustela putorius furo
ENSMPUG00000016477
N
ENSP00000338217
Macaca fascicularis
ENSP00000338217
N
Myotis_brandtii_ZNF532_10006574
Myotis brandtii
Myotis_brandtii_ZNF532_10006574
N
ZNF532
Myotis lucifugus
ENSMLUG00000000137
N
ZNF532
Felis catus
ENSFCAG00000013988
N
ZNF532
Equus caballus
ENSECAG00000014565
N
ZNF532
Ornithorhynchus anatinus
ENSOANG00000003439
N
ZNF532
Otolemur garnettii
ENSOGAG00000016596
N
ZNF532
Tursiops truncatus
ENSTTRG00000007669
N
ZNF532
Vicugna pacos
ENSVPAG00000008243
N
ZNF532
Cavia porcellus
ENSCPOG00000005888
N
ZNF532
Callithrix jacchus
ENSCJAG00000003543
N
ZNF532
Canis familiaris
ENSCAFG00000000103
N