CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0010s03000
(
Populus trichocarpa
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
POPTR_0010s03000
T180099_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0010s03000.1
FAR1
71
147
EFYSVYATRVGFRTRTGQLYRSRTDGSVASRRFVCSKEGFQLNSRMGCPAFIRVQRRDSGKWVVDQIHKDHNHELGD
POPTR_0010s03000.1
FAR1
225
301
HFYLRYADEAGFKTRIGQLFRSKNDGSITSRRFVCSKEGFQHPSRVGCGAFMRIKRQDSGTWMVDRLQKDHNHDLEP
Links
Other
FAR1
family TFs
Other
Populus trichocarpa
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_06344
Capronia coronata
A1O1_06344
N
0.000
A1O5_08668
Cladophialophora psammophila
A1O5_08668
N
0.000
A1O7_06488
Cladophialophora yegresii
A1O7_06488
N
0.000
A1O9_07634
Exophiala aquamarina
A1O9_07634
N
0.000
G647_06048
Cladophialophora carrionii
G647_06048
N
0.000
HMPREF1120_03979
Exophiala dermatitidis
HMPREF1120_03979
N
0.000
HMPREF1541_08519
Cyphellophora europaea
HMPREF1541_08519
N
0.000
PV04_06895
Capronia semiimmersa
PV04_06895
N
0.000
PV05_07865
Exophiala xenobiotica
PV05_07865
N
0.000
PV06_10105
Exophiala oligosperma
PV06_10105
N
0.000
PV08_08165
Exophiala spinifera
PV08_08165
N
0.000
PV10_08229
Exophiala mesophila
PV10_08229
N
0.000
PV11_06892
Exophiala sideris
PV11_06892
N
0.000
W97_00406
Coniosporium apollinis
W97_00406
N
0.000
Z517_00964
Fonsecaea pedrosoi
Z517_00964
N
0.000
Z519_03990
Cladophialophora bantiana
Z519_03990
N
0.000