CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_05s0020g02450
(
Vitis vinifera
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
VIT_05s0020g02450
T180840_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_05s0020g02450.t01
FAR1
36
112
EFYSLYAAHTGFKIRIGQLYRSRSNGSVSSRRFVCSKEGFQLHSRTGCLAFIRVQRVESGKWVIDNFKKDHNHELEP
VIT_05s0020g02450.t01
FAR1
187
263
KNYNAYAASTGFKIRIGQLFRSRDDGLITCRRFVCSKEGHQHSSRVGCGAFIRVKRQDSGMWVVDRFIKEHNHDLDP
Links
Other
FAR1
family TFs
Other
Vitis vinifera
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.253860
Cucumis sativus
Cucsa.253860
N
0.708
evm.TU.supercontig_16.55
Carica papaya
evm.TU.supercontig_16.55
N
0.701
GLYMA15G10830
Glycine max
GLYMA15G10830
N
0.708
MDP0000254218
Malus domestica
MDP0000254218
N
0.701
MDP0000295749
Malus domestica
MDP0000295749
N
0.708
PK22885.1
Cannabis sativa
PK22885.1
N
0.701
Pm008044
Prunus mume
Pm008044
N
0.701
POPTR_0008s20380
Populus trichocarpa
POPTR_0008s20380
N
0.714
PRUPE_ppa001884mg
Prunus persica
PRUPE_ppa001884mg
N
0.701
SapurV1A.0152s0560
Salix purpurea
SapurV1A.0152s0560
N
0.708
SapurV1A.1026s0020
Salix purpurea
SapurV1A.1026s0020
N
0.708
Solyc10g084220.1
Solanum lycopersicum
Solyc10g084220.1
N
0.701