CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
VIT_18s0122g00530
(
Vitis vinifera
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
VIT_18s0122g00530
T180863_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_18s0122g00530.t01
FAR1
77
165
IFYNSYARRIGFSTRVSVYQRSRRDGSIICRQIVCSREGFRREGGENRSKRQRTVTRVGCKAQMTVKKQNSGKWAVTKLVKEHNHDLVP
Links
Other
FAR1
family TFs
Other
Vitis vinifera
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_007_00963
Aquilegia coerulea
Aquca_007_00963
N
0.778
cassava23935.valid.m1
Manihot esculenta
cassava23935.valid.m1
N
0.944
Ciclev10000383m.g
Citrus clementina
Ciclev10000383m.g
N
0.910
Eucgr.F03610
Eucalyptus grandis
Eucgr.F03610
N
0.811
evm.TU.contig_24967.4
Carica papaya
evm.TU.contig_24967.4
N
0.921
gene29166-v1.0-hybrid
Fragaria vesca
gene29166-v1.0-hybrid
N
0.933
MDP0000722905
Malus domestica
MDP0000722905
N
0.933
orange1.1g004450m.g
Citrus sinensis
orange1.1g004450m.g
N
0.910
POPTR_0005s27900
Populus trichocarpa
POPTR_0005s27900
N
0.933
PRUPE_ppa026999mg
Prunus persica
PRUPE_ppa026999mg
N
0.933
SapurV1A.0554s0220
Salix purpurea
SapurV1A.0554s0220
N
0.933
TCM_034806
Theobroma cacao
TCM_034806
N
0.888