CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
cassava1556.valid.m1
(
Manihot esculenta
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
cassava1556.valid.m1
T181028_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava1556.valid.m1
FAR1
65
141
AFYDAYARRMGFSTHVGQFNRAKPDGPIVTWDFACSREVLKRRNFECCNAMLRIERKNSDNWVVTKFIEEHNHSMTV
Links
Other
FAR1
family TFs
Other
Manihot esculenta
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.5.1120.1
Nectria haematococca
e_gw1.5.1120.1
N
NechaG41909
Fusarium solani
NechaG41909
N
S40285_07773
Stachybotrys chlorohalonata
S40285_07773
N
TRIATDRAFT_243081
Trichoderma atroviride
TRIATDRAFT_243081
N
TRIVIDRAFT_35336
Trichoderma virens
TRIVIDRAFT_35336
N
VHEMI00427
Torrubiella hemipterigena
VHEMI00427
N