CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10024069m.g
(
Capsella rubella
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Carubv10024069m.g
T181280_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10024069m
FAR1
37
127
MFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVSIRGKFGSVRKPRPSTREGCKAMIHVKYDRSGKWVITKFVKDHNHPLVV
Links
Other
FAR1
family TFs
Other
Capsella rubella
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_025840
Albugo laibachii
ALNC14_025840
N
estExt_fgenesh1_kg.C_30353
Phytophthora capsici
estExt_fgenesh1_kg.C_30353
N
F443_05458
Phytophthora parasitica
F443_05458
N
fgenesh_masked-pir_contig_3-abinit-gene-1.85
Pythium irregulare
fgenesh_masked-pir_contig_3-abinit-gene-1.85
N
fgenesh_scip_prom.46568.6018
Phytophthora kernoviae
fgenesh_scip_prom.46568.6018
N
HpaG806527
Hyaloperonospora arabidopsidis
HpaG806527
N
HpaG806838
Hyaloperonospora arabidopsidis
HpaG806838
N
maker-pag1_scaffold_423-snap-gene-0.16
Pythium aphanidermatum
maker-pag1_scaffold_423-snap-gene-0.16
N
maker-par_contig_1307-fgenesh-gene-0.1
Pythium arrhenomanes
maker-par_contig_1307-fgenesh-gene-0.1
N
maker-piw_contig_849-snap-gene-0.12
Pythium iwayamai
maker-piw_contig_849-snap-gene-0.12
N
maker-pve_contig_624-fgenesh-gene-0.7
Pythium vexans
maker-pve_contig_624-fgenesh-gene-0.7
N
Phyra72995
Phytophthora ramorum
Phyra72995
N
Phyra80034
Phytophthora ramorum
Phyra80034
N
Physo128716
Phytophthora sojae
Physo128716
N
SPRG_17213
Saprolegnia parasitica
SPRG_17213
N