CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_16.55
(
Carica papaya
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
evm.TU.supercontig_16.55
T181376_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_16.55
FAR1
44
120
EFYSLYAMRVGFKIRTGQLYRSRTDGTVSSRRFVCSKEGFQLNSRTGCPAFIRVQRRDSGKWVLDQIQKDHNHELGL
evm.model.supercontig_16.55
FAR1
196
272
EFYHIYAESAGFRIRIGQLFRSKVDGSITSRRFVCSKEGFQHPSRVGCGAFMRIKRQDNGTWIVDRLQKDHNHDLEL
Links
Other
FAR1
family TFs
Other
Carica papaya
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCEY_14351
Ancylostoma ceylanicum
ANCCEY_14351
N
0.000
CGOC_0001416501
Cylicostephanus goldi
CGOC_0001416501
N
0.000
HCOI00054300
Haemonchus contortus
HCOI00054300
N
0.000
HPBE_0001687501
Heligmosomoides bakeri
HPBE_0001687501
N
0.000
HPLM_0000958201
Haemonchus placei
HPLM_0000958201
N
0.000
NBR_0000104901
Nippostrongylus brasiliensis
NBR_0000104901
N
0.000
NBR_0000527701
Nippostrongylus brasiliensis
NBR_0000527701
N
0.000
NECAME_15133
Necator americanus
NECAME_15133
N
0.000