CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J20130
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.J20130
T181836_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J20130.1.p
FAR1
148
228
EFYNLYSWQIGFGIRYDRSRRNSQRTKTIQDIVCGCAGKPRKENSRSSRCGCPAMMRIARSNSGGWYVKEHVAEHNHQMSQ
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Db00839
Panicum virgatum
Pavir.Db00839
N
0.716
Pavir.Ia04072
Panicum virgatum
Pavir.Ia04072
N
0.767
Pavir.J04547
Panicum virgatum
Pavir.J04547
N
0.988
Pavir.J18394
Panicum virgatum
Pavir.J18394
N
0.736
Traes_2AL_B21EABE42
Triticum aestivum
Traes_2AL_B21EABE42
N
0.714