foxj1a (Danio rerio)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 ENSDARG00000101919 T185555_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Foxj1
M00161_2.00 		Mus musculus
NNHAAACAAANN
NNTTTGTTTDNN		 PBM
Badis et al.(2009)
Foxj1_3125 		0.853 0.953
FOXJ1
M10547_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HFH4_01 		0.853 0.953
FOXJ3
M03046_2.00 		Homo sapiens
RTAAAVAA
TTBTTTAY		 SELEX
Jolma et al.(2013)
FOXJ3_1 		0.675 0.640
FOXJ3
M03047_2.00 		Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_2 		0.675 0.640
FOXJ3
M03048_2.00 		Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_3 		0.675 0.640
FOXJ3
M02736_2.00 		Homo sapiens
AAACAATAAACA
TGTTTATTGTTT		 SELEX
Jolma et al.(2010)
FOXJ3_dimer 		0.675 0.640
FOXJ3
M02737_2.00 		Homo sapiens
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2010)
FOXJ3_monomer 		0.675 0.640
FOXJ3
M04859_2.00 		Homo sapiens
DYGTMAACAH
DTGTTKACRH		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX 		0.675 0.640
FOXJ3
M09098_2.00 		Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A 		0.675 0.640
FOXJ3
M04860_2.00 		Homo sapiens
RYGTMAACAH
DTGTTKACRY		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX 		0.675 0.640
Foxj3
M00160_2.00 		Mus musculus
NRTAAACAHN
NDTGTTTAYN		 PBM
Badis et al.(2009)
Foxj3_0982 		0.674 0.640
Foxj3
M01981_2.00 		Mus musculus
VNHHAYANN
NNTRTDDNB		 PBM
Weirauch et al.(2014)
pTH6591 		0.674 0.640
Foxj3
M03055_2.00 		Mus musculus
ACGGACACAAT
ATTGTGTCCGT		 SELEX
Jolma et al.(2013)
Foxj3_1 		0.674 0.640
Foxj3
M03056_2.00 		Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
Foxj3_2 		0.674 0.640
Foxj3
M03057_2.00 		Mus musculus
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_3 		0.674 0.640
Foxj3
M03058_2.00 		Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_4 		0.674 0.640
Foxj3
M09102_2.00 		Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A 		0.674 0.640
SPU_007644
M01987_2.00 		Strongylocentrotus purpuratus
NNHHAYDNN
NNHRTDDNN		 PBM
Weirauch et al.(2014)
pTH6497 		0.668 0.616
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000132873 Forkhead 142 231
ENSDARP00000134207 Forkhead 142 231

Links

Other Forkhead family TFs
Other Danio rerio TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL018223 Aedes aegypti AAEL018223 I
AAI57537 Xenopus tropicalis AAI57537 I
ACYPI000143 Acyrthosiphon pisum ACYPI000143 I
Afo_R010397 Aptenodytes forsteri Afo_R010397 I
Alligator_sinensis_CCG002049.1 Alligator sinensis Alligator_sinensis_CCG002049.1 I
Alligator_sinensis_CCG002051.1 Alligator sinensis Alligator_sinensis_CCG002051.1 I
Alligator_sinensis_CCG008095.1 Alligator sinensis Alligator_sinensis_CCG008095.1 I
Alligator_sinensis_CCG008096.1 Alligator sinensis Alligator_sinensis_CCG008096.1 I
bi Drosophila melanogaster FBgn0000179 I
bi Drosophila virilis FBgn0020983 I
CGI_10005914 Crassostrea gigas CGI_10005914 I
Cmyd_10016208 Chelonia mydas Cmyd_10016208 I
Cmyd_10018097 Chelonia mydas Cmyd_10018097 I
Cmyd_10018098 Chelonia mydas Cmyd_10018098 I
D917_09589 Trichinella nativa D917_09589 I
DAPPUDRAFT_13272 Daphnia pulex DAPPUDRAFT_13272 I
EFV62265 Trichinella spiralis EFV62265 I
ENSACAG00000001033 Anolis carolinensis ENSACAG00000001033 I
ENSAMEG00000001090 Ailuropoda melanoleuca ENSAMEG00000001090 I
ENSAMEG00000001112 Ailuropoda melanoleuca ENSAMEG00000001112 I
ENSAMEG00000008802 Ailuropoda melanoleuca ENSAMEG00000008802 I
ENSAMEG00000008826 Ailuropoda melanoleuca ENSAMEG00000008826 I
ENSAMXG00000001528 Astyanax mexicanus ENSAMXG00000001528 I
ENSAMXG00000001540 Astyanax mexicanus ENSAMXG00000001540 I
ENSAMXG00000007070 Astyanax mexicanus ENSAMXG00000007070 I
ENSAMXG00000007100 Astyanax mexicanus ENSAMXG00000007100 I
ENSAMXG00000009196 Astyanax mexicanus ENSAMXG00000009196 I
ENSAMXG00000009197 Astyanax mexicanus ENSAMXG00000009197 I
ENSAPLG00000006488 Anas platyrhynchos ENSAPLG00000006488 I
ENSAPLG00000008848 Anas platyrhynchos ENSAPLG00000008848 I
ENSBTAP00000015125-D1 Bos grunniens ENSBTAP00000015125-D1 I
ENSBTAP00000028930-D1 Bos grunniens ENSBTAP00000028930-D1 I
ENSCPOG00000001042 Cavia porcellus ENSCPOG00000001042 I
ENSCPOG00000001044 Cavia porcellus ENSCPOG00000001044 I
ENSCSAG00000002344 Chlorocebus sabaeus ENSCSAG00000002344 I
ENSCSAG00000002347 Chlorocebus sabaeus ENSCSAG00000002347 I
ENSECAG00000012861 Equus caballus ENSECAG00000012861 I
ENSFALG00000005458 Ficedula albicollis ENSFALG00000005458 I
ENSFALG00000005474 Ficedula albicollis ENSFALG00000005474 I
ENSFALG00000007778 Ficedula albicollis ENSFALG00000007778 I
ENSFALG00000007792 Ficedula albicollis ENSFALG00000007792 I
ENSGALG00000008250 Gallus gallus ENSGALG00000008250 I
ENSGALG00000023577 Gallus gallus ENSGALG00000023577 I
ENSGMOG00000002867 Gadus morhua ENSGMOG00000002867 I
ENSGMOG00000009107 Gadus morhua ENSGMOG00000009107 I
ENSGMOG00000011728 Gadus morhua ENSGMOG00000011728 I
ENSGMOG00000011740 Gadus morhua ENSGMOG00000011740 I
ENSLACG00000002339 Latimeria chalumnae ENSLACG00000002339 I
ENSLACG00000006293 Latimeria chalumnae ENSLACG00000006293 I
ENSLACG00000014713 Latimeria chalumnae ENSLACG00000014713 I
ENSLACG00000015364 Latimeria chalumnae ENSLACG00000015364 I
ENSLOCG00000005064 Lepisosteus oculatus ENSLOCG00000005064 I
ENSLOCG00000005074 Lepisosteus oculatus ENSLOCG00000005074 I
ENSLOCG00000007598 Lepisosteus oculatus ENSLOCG00000007598 I
ENSLOCG00000007616 Lepisosteus oculatus ENSLOCG00000007616 I
ENSMEUG00000010232 Macropus eugenii ENSMEUG00000010232 I
ENSMGAG00000010084 Meleagris gallopavo ENSMGAG00000010084 I
ENSMICG00000008299 Microcebus murinus ENSMICG00000008299 I
ENSMMUG00000009859 Macaca mulatta ENSMMUG00000009859 I
ENSMPUG00000002715 Mustela putorius furo ENSMPUG00000002715 I
ENSMPUG00000002720 Mustela putorius furo ENSMPUG00000002720 I
ENSMPUG00000015118 Mustela putorius furo ENSMPUG00000015118 I
ENSMPUG00000015166 Mustela putorius furo ENSMPUG00000015166 I
ENSNLEG00000000224 Nomascus leucogenys ENSNLEG00000000224 I
ENSNLEG00000000423 Nomascus leucogenys ENSNLEG00000000423 I
ENSNLEG00000000427 Nomascus leucogenys ENSNLEG00000000427 I
ENSOARG00000006249 Ovis aries ENSOARG00000006249 I
ENSOARG00000006614 Ovis aries ENSOARG00000006614 I
ENSOARG00000016309 Ovis aries ENSOARG00000016309 I
ENSONIG00000000182 Oreochromis niloticus ENSONIG00000000182 I
ENSONIG00000000187 Oreochromis niloticus ENSONIG00000000187 I
ENSONIG00000001919 Oreochromis niloticus ENSONIG00000001919 I
ENSONIG00000010459 Oreochromis niloticus ENSONIG00000010459 I
ENSONIG00000013614 Oreochromis niloticus ENSONIG00000013614 I
ENSP00000257566 Macaca fascicularis ENSP00000257566 I
ENSP00000377435 Macaca fascicularis ENSP00000377435 I
ENSP00000377435-D1 Bos grunniens ENSP00000377435-D1 I
ENSP00000384152 Macaca fascicularis ENSP00000384152 I
ENSPANG00000008730 Papio anubis ENSPANG00000008730 I
ENSPANG00000016891 Papio anubis ENSPANG00000016891 I
ENSPANG00000022155 Papio anubis ENSPANG00000022155 I
ENSPFOG00000016001 Poecilia formosa ENSPFOG00000016001 I
ENSPFOG00000019824 Poecilia formosa ENSPFOG00000019824 I
ENSPFOG00000022507 Poecilia formosa ENSPFOG00000022507 I
ENSPFOG00000024759 Poecilia formosa ENSPFOG00000024759 I
ENSPPYG00000004994 Pongo abelii ENSPPYG00000004994 I
ENSPPYG00000004995 Pongo abelii ENSPPYG00000004995 I
ENSPPYG00000008800 Pongo abelii ENSPPYG00000008800 I
ENSPSIG00000017536 Pelodiscus sinensis ENSPSIG00000017536 I
ENSPSIG00000017594 Pelodiscus sinensis ENSPSIG00000017594 I
ENSSHAG00000004253 Sarcophilus harrisii ENSSHAG00000004253 I
ENSSHAG00000012290 Sarcophilus harrisii ENSSHAG00000012290 I
ENSSHAG00000012638 Sarcophilus harrisii ENSSHAG00000012638 I
ENSSTOG00000009350 Ictidomys tridecemlineatus ENSSTOG00000009350 I
ENSSTOG00000009394 Ictidomys tridecemlineatus ENSSTOG00000009394 I
ENSSTOG00000009817 Ictidomys tridecemlineatus ENSSTOG00000009817 I
ENSTGUG00000007802 Taeniopygia guttata ENSTGUG00000007802 I
ENSTSYG00000008994 Tarsius syrichta ENSTSYG00000008994 I
ENSXMAG00000000486 Xiphophorus maculatus ENSXMAG00000000486 I
ENSXMAG00000005348 Xiphophorus maculatus ENSXMAG00000005348 I
ENSXMAG00000005372 Xiphophorus maculatus ENSXMAG00000005372 I
ENSXMAG00000005717 Xiphophorus maculatus ENSXMAG00000005717 I
estExt_fgenesh2_pg.C_1570024 Branchiostoma floridae estExt_fgenesh2_pg.C_1570024 D
estExt_fgenesh2_pg.C_1570035 Branchiostoma floridae estExt_fgenesh2_pg.C_1570035 I
fgenesh2_pg.scaffold_89000016 Branchiostoma floridae fgenesh2_pg.scaffold_89000016 I
GA22741 Drosophila pseudoobscura FBgn0244144 I
GB49684 Apis mellifera GB49684 I
GE16345 Drosophila yakuba FBgn0233875 I
Gfo_R010838 Geospiza fortis Gfo_R010838 I
GK15734 Drosophila willistoni FBgn0217737 I
GL14298 Drosophila persimilis FBgn0151903 I
GM12345 Drosophila sechellia FBgn0167282 I
Myotis_brandtii_Tbx3_10028216 Myotis brandtii Myotis_brandtii_Tbx3_10028216 I
Myotis_brandtii_TBX5_10028219 Myotis brandtii Myotis_brandtii_TBX5_10028219 I
Ocbimv22029974m.g Octopus bimaculoides Ocbimv22029974m.g I
Ogr02099 Ophisaurus gracilis Ogr02099 I
Ogr05323 Ophisaurus gracilis Ogr05323 I
Ogr11256 Ophisaurus gracilis Ogr11256 I
Pvit_13524 Pogona vitticeps Pvit_13524 I
Pvit_16428 Pogona vitticeps Pvit_16428 I
Pvit_16429 Pogona vitticeps Pvit_16429 I
Sakowv30012255m.g Saccoglossus kowalevskii Sakowv30012255m.g I
SPU_023386 Strongylocentrotus purpuratus SPU_023386 I
TBX2 Bos taurus ENSBTAG00000014278 I
TBX2 Homo sapiens ENSG00000121068 D
TBX2 Loxodonta africana ENSLAFG00000006596 I
TBX2 Microcebus murinus ENSMICG00000016649 I
TBX2 Myotis lucifugus ENSMLUG00000011673 I
TBX2 Monodelphis domestica ENSMODG00000014204 I
Tbx2 Mus musculus ENSMUSG00000000093 D
TBX2 Otolemur garnettii ENSOGAG00000014815 I
TBX2 Ochotona princeps ENSOPRG00000012183 I
TBX2 Pan troglodytes ENSPTRG00000009489 I
TBX2 Sus scrofa ENSSSCG00000027060 I
TBX2 Taeniopygia guttata ENSTGUG00000007813 I
TBX2 Tursiops truncatus ENSTTRG00000004541 I
tbx2 Xenopus tropicalis XB-GENE-1018115 I
tbx2.L Xenopus laevis XB-GENE-1018122 I
tbx2.S Xenopus laevis XB-GENE-6255176 I
tbx2a Danio rerio ENSDARG00000018025 I
tbx2b Danio rerio ENSDARG00000006120 I
tbx2b Gasterosteus aculeatus ENSGACG00000020309 I
tbx2b Oryzias latipes ENSORLG00000010011 I
TBX3 Bos taurus ENSBTAG00000021706 I
TBX3 Canis familiaris ENSCAFG00000009216 I
TBX3 Callithrix jacchus ENSCJAG00000009716 I
TBX3 Cavia porcellus ENSCPOG00000003952 I
TBX3 Dasypus novemcinctus ENSDNOG00000044358 I
TBX3 Erinaceus europaeus ENSEEUG00000008506 I
TBX3 Homo sapiens ENSG00000135111 D
TBX3 Gorilla gorilla ENSGGOG00000004238 I
TBX3 Loxodonta africana ENSLAFG00000002948 I
TBX3 Microcebus murinus ENSMICG00000010947 I
TBX3 Myotis lucifugus ENSMLUG00000007567 I
TBX3 Macaca mulatta ENSMMUG00000015070 I
TBX3 Monodelphis domestica ENSMODG00000012059 I
Tbx3 Mus musculus ENSMUSG00000018604 D
TBX3 Ornithorhynchus anatinus ENSOANG00000007095 I
TBX3 Oryctolagus cuniculus ENSOCUG00000014595 I
TBX3 Otolemur garnettii ENSOGAG00000016212 I
TBX3 Ochotona princeps ENSOPRG00000004462 I
TBX3 Pan troglodytes ENSPTRG00000023749 I
Tbx3 Rattus norvegicus ENSRNOG00000008706 I
TBX3 Sus scrofa ENSSSCG00000009865 I
TBX3 Tupaia belangeri ENSTBEG00000014612 I
tbx3 Xenopus tropicalis XB-GENE-1018231 I
tbx3.L Xenopus laevis XB-GENE-6252891 I
tbx3.S Xenopus laevis XB-GENE-1018237 I
tbx3a Danio rerio ENSDARG00000002216 I
tbx3a Gasterosteus aculeatus ENSGACG00000016783 I
tbx3a Oryzias latipes ENSORLG00000007316 I
tbx3a Tetraodon nigroviridis ENSTNIG00000009035 I
tbx3a Takifugu rubripes ENSTRUG00000015097 I
tbx3b Danio rerio ENSDARG00000061509 I
TBX4 Bos taurus ENSBTAG00000009968 I
TBX4 Canis familiaris ENSCAFG00000017740 I
TBX4 Callithrix jacchus ENSCJAG00000001281 I
tbx4 Danio rerio ENSDARG00000030058 I
TBX4 Dasypus novemcinctus ENSDNOG00000035197 I
Tbx4 Dipodomys ordii ENSDORG00000008085 I
TBX4 Equus caballus ENSECAG00000024414 I
TBX4 Erinaceus europaeus ENSEEUG00000009722 I
TBX4 Felis catus ENSFCAG00000026664 I
TBX4 Homo sapiens ENSG00000121075 D
tbx4 Gasterosteus aculeatus ENSGACG00000013565 I
TBX4 Gorilla gorilla ENSGGOG00000013904 I
TBX4 Loxodonta africana ENSLAFG00000006608 I
TBX4 Meleagris gallopavo ENSMGAG00000007617 I
TBX4 Microcebus murinus ENSMICG00000016673 I
TBX4 Myotis lucifugus ENSMLUG00000011682 I
TBX4 Macaca mulatta ENSMMUG00000022580 I
TBX4 Monodelphis domestica ENSMODG00000014216 I
Tbx4 Mus musculus ENSMUSG00000000094 D
TBX4 Ornithorhynchus anatinus ENSOANG00000011525 I
TBX4 Oryctolagus cuniculus ENSOCUG00000010834 I
TBX4 Otolemur garnettii ENSOGAG00000007474 I
TBX4 Ochotona princeps ENSOPRG00000012257 I
tbx4 Oryzias latipes ENSORLG00000014806 I
TBX4 Pan troglodytes ENSPTRG00000009491 I
TBX4 Pteropus vampyrus ENSPVAG00000016866 I
Tbx4 Rattus norvegicus ENSRNOG00000003544 I
TBX4 Sus scrofa ENSSSCG00000022980 I
tbx4 Tetraodon nigroviridis ENSTNIG00000014394 I
tbx4 Takifugu rubripes ENSTRUG00000008071 I
TBX4 Tursiops truncatus ENSTTRG00000004552 I
tbx4 Xenopus tropicalis XB-GENE-951382 I
TBX5 Bos taurus ENSBTAG00000011384 I
TBX5 Canis familiaris ENSCAFG00000009189 I
TBX5 Callithrix jacchus ENSCJAG00000009744 I
TBX5 Cavia porcellus ENSCPOG00000014558 I
TBX5 Dasypus novemcinctus ENSDNOG00000025303 I
TBX5 Equus caballus ENSECAG00000017114 I
TBX5 Felis catus ENSFCAG00000005574 I
TBX5 Homo sapiens ENSG00000089225 D
TBX5 Gallus gallus ENSGALG00000008253 I
TBX5 Gorilla gorilla ENSGGOG00000013775 I
TBX5 Loxodonta africana ENSLAFG00000010125 I
TBX5 Meleagris gallopavo ENSMGAG00000010075 I
TBX5 Myotis lucifugus ENSMLUG00000016530 I
TBX5 Macaca mulatta ENSMMUG00000016202 I
TBX5 Monodelphis domestica ENSMODG00000012045 I
Tbx5 Mus musculus ENSMUSG00000018263 D
TBX5 Oryctolagus cuniculus ENSOCUG00000012715 I
TBX5 Otolemur garnettii ENSOGAG00000016204 I
tbx5 Oryzias latipes ENSORLG00000008185 I
TBX5 Pan troglodytes ENSPTRG00000005496 I
Tbx5 Rattus norvegicus ENSRNOG00000001399 I
TBX5 Sus scrofa ENSSSCG00000009867 I
TBX5 Tursiops truncatus ENSTTRG00000000980 I
TBX5 Vicugna pacos ENSVPAG00000009445 I
tbx5 Xenopus tropicalis XB-GENE-486855 I
tbx5.L Xenopus laevis XB-GENE-865653 I
tbx5a Danio rerio ENSDARG00000024894 I
tbx5a Gasterosteus aculeatus ENSGACG00000016787 I
tbx5a Oryzias latipes ENSORLG00000007339 I
tbx5a Tetraodon nigroviridis ENSTNIG00000009036 I
tbx5a Takifugu rubripes ENSTRUG00000015054 I
tbx5b Danio rerio ENSDARG00000092060 I
tbx5b Gasterosteus aculeatus ENSGACG00000009550 I
tbx5b Tetraodon nigroviridis ENSTNIG00000015908 I
tbx5b Takifugu rubripes ENSTRUG00000016260 I
tetur33g01070 Tetranychus urticae tetur33g01070 I
TriadG59753 Trichoplax adhaerens TriadG59753 I
XP_001195863 Strongylocentrotus purpuratus XP_001195863 D
XP_008203914.1 Nasonia vitripennis XP_008203914.1 D