CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FOXN1
(
Homo sapiens
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSG00000109101
T185764_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXN1
M10531_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WHN_B
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxn1
M01010_2.00
Mus musculus
NAHRCNNNNN
NNNNNGYDTN
PBM
Nakagawa et al.(2013)
Foxn1
0.849
0.988
Foxn4
M01011_2.00
Mus musculus
NNNVACGCNN
NNGCGTBNNN
PBM
Nakagawa et al.(2013)
Foxn4
0.798
0.895
jumu
M01012_2.00
Drosophila melanogaster
NNNNVACGCN
NGCGTBNNNN
PBM
Nakagawa et al.(2013)
Jumeau
0.734
0.698
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000226247
Forkhead
271
361
KPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKSGSSSRKGCLWALNPAKIDKMQEELQ
ENSP00000464645
Forkhead
271
361
KPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKSGSSSRKGCLWALNPAKIDKMQEELQ
Links
Other
Forkhead
family TFs
Other
Homo sapiens
TFs
192 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL018187
Aedes aegypti
AAEL018187
I
0.768
AALB009566
Anopheles albimanus
AALB009566
I
0.752
Aan_R003515
Calypte anna
Aan_R003515
I
0.837
Aan_R010366
Calypte anna
Aan_R010366
I
0.806
AARA009846
Anopheles arabiensis
AARA009846
I
0.752
AATE005421
Anopheles atroparvus
AATE005421
I
0.752
ACUA002164
Anopheles culicifacies
ACUA002164
I
0.744
ACYPI21591
Acyrthosiphon pisum
ACYPI21591
I
0.740
ADIR003350
Anopheles dirus
ADIR003350
I
0.752
AEPI007299
Anopheles epiroticus
AEPI007299
I
0.751
AFAF001586
Anopheles farauti
AFAF001586
I
0.752
Afo_R000794
Aptenodytes forsteri
Afo_R000794
I
0.806
Afo_R013485
Aptenodytes forsteri
Afo_R013485
I
0.837
AFUN011236
Anopheles funestus
AFUN011236
I
0.744
AGAP003940
Anopheles gambiae
AGAP003940
I
0.752
Alligator_sinensis_CCG002668.1
Alligator sinensis
Alligator_sinensis_CCG002668.1
I
0.849
Alligator_sinensis_CCG016523.1
Alligator sinensis
Alligator_sinensis_CCG016523.1
I
0.806
AMAM019487
Anopheles maculatus
AMAM019487
I
0.740
AMIN000296
Anopheles minimus
AMIN000296
I
0.744
AQUA009136
Anopheles quadriannulatus
AQUA009136
I
0.752
ASIS014250
Anopheles sinensis
ASIS014250
I
0.752
ASTEI00952
Anopheles stephensi
ASTEI00952
I
0.740
BGIBMGA000445
Bombyx mori
BGIBMGA000445
I
0.784
BGLB014390
Biomphalaria glabrata
BGLB014390
I
0.707
Brh_R000146
Buceros rhinoceros
Brh_R000146
I
0.837
Brh_R003679
Buceros rhinoceros
Brh_R003679
I
0.806
Cflo_09362--XP_394749.3_APIME
Camponotus floridanus
Cflo_09362--XP_394749.3_APIME
I
0.737
CGI_10014633
Crassostrea gigas
CGI_10014633
I
0.695
CLEC011741
Cimex lectularius
CLEC011741
I
0.767
Cmyd_10015695
Chelonia mydas
Cmyd_10015695
I
0.798
Cmyd_10016296
Chelonia mydas
Cmyd_10016296
I
0.752
CPIJ001711
Culex quinquefasciatus
CPIJ001711
I
0.752
CpipJ_CPIJ001711
Culex pipiens
CpipJ_CPIJ001711
I
0.752
ENSACAG00000011719
Anolis carolinensis
ENSACAG00000011719
I
0.785
ENSACAG00000012187
Anolis carolinensis
ENSACAG00000012187
I
0.849
ENSAMEG00000004934
Ailuropoda melanoleuca
ENSAMEG00000004934
I
0.849
ENSAMEG00000016548
Ailuropoda melanoleuca
ENSAMEG00000016548
I
0.806
ENSAMXG00000006838
Astyanax mexicanus
ENSAMXG00000006838
I
0.806
ENSAMXG00000017753
Astyanax mexicanus
ENSAMXG00000017753
I
0.810
ENSAPLG00000002586
Anas platyrhynchos
ENSAPLG00000002586
I
0.806
ENSAPLG00000014618
Anas platyrhynchos
ENSAPLG00000014618
I
0.837
ENSBTAP00000014397-D1
Bos grunniens
ENSBTAP00000014397-D1
I
0.806
ENSBTAP00000017410-D1
Bos grunniens
ENSBTAP00000017410-D1
I
0.849
ENSCSAG00000002781
Chlorocebus sabaeus
ENSCSAG00000002781
I
0.806
ENSCSAG00000007275
Chlorocebus sabaeus
ENSCSAG00000007275
I
0.849
ENSFALG00000006460
Ficedula albicollis
ENSFALG00000006460
I
0.837
ENSFALG00000008767
Ficedula albicollis
ENSFALG00000008767
I
0.806
ENSGALG00000003654
Gallus gallus
ENSGALG00000003654
I
0.837
ENSGMOG00000002294
Gadus morhua
ENSGMOG00000002294
I
0.823
ENSGMOG00000012022
Gadus morhua
ENSGMOG00000012022
I
0.806
ENSLACG00000011453
Latimeria chalumnae
ENSLACG00000011453
I
0.806
ENSLAFG00000031464
Loxodonta africana
ENSLAFG00000031464
I
0.775
ENSLOCG00000000236
Lepisosteus oculatus
ENSLOCG00000000236
I
0.806
ENSLOCG00000004428
Lepisosteus oculatus
ENSLOCG00000004428
I
0.806
ENSLOCG00000005491
Lepisosteus oculatus
ENSLOCG00000005491
I
0.733
ENSMEUG00000015975
Macropus eugenii
ENSMEUG00000015975
I
0.806
ENSMMUG00000020375
Macaca mulatta
ENSMMUG00000020375
I
0.806
ENSMPUG00000003606
Mustela putorius furo
ENSMPUG00000003606
I
0.806
ENSMPUG00000014265
Mustela putorius furo
ENSMPUG00000014265
I
0.849
ENSNLEG00000001602
Nomascus leucogenys
ENSNLEG00000001602
I
0.806
ENSNLEG00000002304
Nomascus leucogenys
ENSNLEG00000002304
I
0.849
ENSOANG00000014185
Ornithorhynchus anatinus
ENSOANG00000014185
I
0.849
ENSOARG00000016041
Ovis aries
ENSOARG00000016041
I
0.806
ENSOARG00000018638
Ovis aries
ENSOARG00000018638
I
0.849
ENSONIG00000008179
Oreochromis niloticus
ENSONIG00000008179
I
0.822
ENSONIG00000013504
Oreochromis niloticus
ENSONIG00000013504
I
0.815
ENSORLG00000008113
Oryzias latipes
ENSORLG00000008113
I
0.822
ENSP00000226247
Macaca fascicularis
ENSP00000226247
I
0.849
ENSP00000299162
Macaca fascicularis
ENSP00000299162
I
0.806
ENSPANG00000019523
Papio anubis
ENSPANG00000019523
I
0.806
ENSPANG00000023451
Papio anubis
ENSPANG00000023451
I
0.849
ENSPFOG00000006570
Poecilia formosa
ENSPFOG00000006570
I
0.822
ENSPFOG00000013538
Poecilia formosa
ENSPFOG00000013538
I
0.790
ENSPMAG00000004307
Petromyzon marinus
ENSPMAG00000004307
I
0.759
ENSPPYG00000004931
Pongo abelii
ENSPPYG00000004931
I
0.806
ENSPPYG00000008096
Pongo abelii
ENSPPYG00000008096
I
0.849
ENSPSIG00000004744
Pelodiscus sinensis
ENSPSIG00000004744
I
0.806
ENSPSIG00000009226
Pelodiscus sinensis
ENSPSIG00000009226
I
0.825
ENSSARG00000006773
Sorex araneus
ENSSARG00000006773
I
0.849
ENSSHAG00000013650
Sarcophilus harrisii
ENSSHAG00000013650
I
0.849
ENSSSCG00000009936
Sus scrofa
ENSSSCG00000009936
I
0.806
ENSSSCG00000022921
Sus scrofa
ENSSSCG00000022921
I
0.849
ENSSSCG00000029194
Sus scrofa
ENSSSCG00000029194
I
0.683
ENSSTOG00000028800
Ictidomys tridecemlineatus
ENSSTOG00000028800
I
0.806
ENSSTOG00000028981
Ictidomys tridecemlineatus
ENSSTOG00000028981
I
0.849
ENSXMAG00000007879
Xiphophorus maculatus
ENSXMAG00000007879
I
0.815
ENSXMAG00000011786
Xiphophorus maculatus
ENSXMAG00000011786
I
0.822
estExt_fgenesh2_pg.C_1860025
Branchiostoma floridae
estExt_fgenesh2_pg.C_1860025
I
0.763
fgenesh2_pg.scaffold_129000050
Branchiostoma floridae
fgenesh2_pg.scaffold_129000050
I
0.763
FOXN1
Bos taurus
ENSBTAG00000013095
I
0.849
FOXN1
Canis familiaris
ENSCAFG00000018709
I
0.849
FOXN1
Callithrix jacchus
ENSCJAG00000012705
I
0.849
FOXN1
Cavia porcellus
ENSCPOG00000009810
I
0.849
foxn1
Danio rerio
ENSDARG00000011879
I
0.822
FOXN1
Dasypus novemcinctus
ENSDNOG00000006144
I
0.849
Foxn1
Dipodomys ordii
ENSDORG00000015116
I
0.849
FOXN1
Equus caballus
ENSECAG00000010691
I
0.849
FOXN1
Erinaceus europaeus
ENSEEUG00000006629
I
0.840
FOXN1
Echinops telfairi
ENSETEG00000015002
I
0.840
FOXN1
Felis catus
ENSFCAG00000008268
I
0.849
foxn1
Gasterosteus aculeatus
ENSGACG00000008619
I
0.822
FOXN1
Gorilla gorilla
ENSGGOG00000009682
I
0.849
FOXN1
Loxodonta africana
ENSLAFG00000014501
I
0.849
FOXN1
Meleagris gallopavo
ENSMGAG00000005734
I
0.837
FOXN1
Microcebus murinus
ENSMICG00000016795
I
0.849
FOXN1
Myotis lucifugus
ENSMLUG00000012353
I
0.849
FOXN1
Macaca mulatta
ENSMMUG00000021975
I
0.849
FOXN1
Monodelphis domestica
ENSMODG00000019251
I
0.849
Foxn1
Mus musculus
ENSMUSG00000002057
D
0.849
FOXN1
Oryctolagus cuniculus
ENSOCUG00000013779
I
0.849
FOXN1
Otolemur garnettii
ENSOGAG00000007093
I
0.849
FOXN1
Ochotona princeps
ENSOPRG00000012389
I
0.849
FOXN1
Procavia capensis
ENSPCAG00000010796
I
0.849
FOXN1
Pan troglodytes
ENSPTRG00000008920
I
0.849
FOXN1
Pteropus vampyrus
ENSPVAG00000002892
I
0.849
Foxn1
Rattus norvegicus
ENSRNOG00000010870
I
0.849
FOXN1
Sus scrofa
ENSSSCG00000017762
I
0.683
FOXN1
Tupaia belangeri
ENSTBEG00000007940
I
0.849
FOXN1
Taeniopygia guttata
ENSTGUG00000005999
I
0.837
FOXN1
Tursiops truncatus
ENSTTRG00000004014
I
0.849
FOXN4
Bos taurus
ENSBTAG00000010847
I
0.806
FOXN4
Canis familiaris
ENSCAFG00000010915
I
0.806
FOXN4
Callithrix jacchus
ENSCJAG00000010010
I
0.738
FOXN4
Cavia porcellus
ENSCPOG00000000942
I
0.806
foxn4
Danio rerio
ENSDARG00000010591
I
0.806
FOXN4
Dasypus novemcinctus
ENSDNOG00000015606
I
0.790
FOXN4
Felis catus
ENSFCAG00000003124
I
0.806
FOXN4
Homo sapiens
ENSG00000139445
I
0.806
foxn4
Gasterosteus aculeatus
ENSGACG00000009215
I
0.815
FoxN4
Gallus gallus
ENSGALG00000005062
I
0.788
FOXN4
Gorilla gorilla
ENSGGOG00000009323
I
0.806
FOXN4
Meleagris gallopavo
ENSMGAG00000006116
I
0.806
Foxn4
Mus musculus
ENSMUSG00000042002
D
0.798
FOXN4
Ornithorhynchus anatinus
ENSOANG00000008810
I
0.806
FOXN4
Oryctolagus cuniculus
ENSOCUG00000005185
I
0.790
FOXN4
Otolemur garnettii
ENSOGAG00000007455
I
0.806
FOXN4
Ochotona princeps
ENSOPRG00000006537
I
0.798
FOXN4
Oryzias latipes
ENSORLG00000007587
I
0.802
FOXN4
Pan troglodytes
ENSPTRG00000005421
I
0.806
FOXN4
Pteropus vampyrus
ENSPVAG00000007463
I
0.806
Foxn4
Rattus norvegicus
ENSRNOG00000000691
I
0.802
FOXN4
Tupaia belangeri
ENSTBEG00000005233
I
0.806
FOXN4
Taeniopygia guttata
ENSTGUG00000007235
I
0.806
foxn4
Tetraodon nigroviridis
ENSTNIG00000015894
I
0.815
foxn4
Takifugu rubripes
ENSTRUG00000015456
I
0.815
FOXN4
Tursiops truncatus
ENSTTRG00000006397
I
0.806
foxn4
Xenopus tropicalis
XB-GENE-981086
I
0.806
foxn4.S
Xenopus laevis
XB-GENE-981090
I
0.806
GA17887
Drosophila pseudoobscura
FBgn0077896
I
0.734
GA25156
Drosophila pseudoobscura
FBgn0246538
I
0.710
GB41890
Apis mellifera
GB41890
I
0.776
GD18690
Drosophila simulans
FBgn0190211
I
0.734
GE26032
Drosophila yakuba
FBgn0243075
I
0.734
GF17528
Drosophila ananassae
FBgn0094546
I
0.734
Gfo_R003176
Geospiza fortis
Gfo_R003176
I
0.806
Gfo_R011440
Geospiza fortis
Gfo_R011440
I
0.837
GG17529
Drosophila erecta
FBgn0109754
I
0.734
GH19127
Drosophila grimshawi
FBgn0126594
I
0.734
GI23584
Drosophila mojavensis
FBgn0146310
I
0.734
GJ23559
Drosophila virilis
FBgn0210656
I
0.734
GK11545
Drosophila willistoni
FBgn0213556
I
0.734
GM23879
Drosophila sechellia
FBgn0178744
I
0.734
HHAL008872-PA
Halyomorpha halys
HHAL008872-PA
I
0.765
ISCW008179
Ixodes scapularis
ISCW008179
I
0.761
jumu
Drosophila melanogaster
FBgn0015396
D
0.734
KGM_21935
Danaus plexippus
KGM_21935
I
0.784
L798_10143
Zootermopsis nevadensis
L798_10143
I
0.794
LCUP000947
Lucilia cuprina
LCUP000947
I
0.736
LDEC004155
Leptinotarsa decemlineata
LDEC004155
I
0.741
LLOJ002533
Lutzomyia longipalpis
LLOJ002533
I
0.752
LotgiG77849
Lottia gigantea
LotgiG77849
I
0.702
MDOA003678
Musca domestica
MDOA003678
I
0.752
Myotis_brandtii_Foxn1_10015981
Myotis brandtii
Myotis_brandtii_Foxn1_10015981
I
0.849
Myotis_brandtii_FOXN4_10027419
Myotis brandtii
Myotis_brandtii_FOXN4_10027419
I
0.766
NEMVEDRAFT_v1g121754
Nematostella vectensis
NEMVEDRAFT_v1g121754
I
0.677
Ogr03484
Ophisaurus gracilis
Ogr03484
I
0.849
Ogr14394
Ophisaurus gracilis
Ogr14394
I
0.782
PHUM047550
Pediculus humanus
PHUM047550
I
0.733
PPAI007934
Phlebotomus papatasi
PPAI007934
I
0.752
Pvit_00420
Pogona vitticeps
Pvit_00420
I
0.780
Pvit_02436
Pogona vitticeps
Pvit_02436
I
0.806
RPRC003475
Rhodnius prolixus
RPRC003475
I
0.761
Sakowv30034418m.g
Saccoglossus kowalevskii
Sakowv30034418m.g
I
0.759
SINV24088
Solenopsis invicta
SINV24088
I
0.760
SMAR013946
Strigamia maritima
SMAR013946
I
0.726
Tal_R000657
Tyto alba
Tal_R000657
I
0.806
Tal_R011069
Tyto alba
Tal_R011069
I
0.837
TC012532
Tribolium castaneum
TC012532
I
0.731
XP_002166457.1
Hydra magnipapillata
XP_002166457.1
I
0.669
XP_002937190
Xenopus tropicalis
XP_002937190
I
0.849
YQE_08440
Dendroctonus ponderosae
YQE_08440
I
0.752