CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FOXP1
(
Otolemur garnettii
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSOGAG00000008367
T186525_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXP1
M00836_2.00
Homo sapiens
NRTMAACANN
NNTGTTKAYN
PBM
Gabut et al.(2011)
pEX0123
0.827
1.000
FOXP1
M00837_2.00
Homo sapiens
DGTAAACAA
TTGTTTACH
PBM
Gabut et al.(2011)
pEX0124
0.827
1.000
FOXP1
M01976_2.00
Homo sapiens
RTAAACAA
TTGTTTAY
PBM
Weirauch et al.(2014)
pTH5656
0.827
1.000
Foxp1
M00793_2.00
Mus musculus
NRTMAAYAN
NTRTTKAYN
PBM
Weirauch et al.(2013)
pTH3855
0.827
1.000
FOXP1
M04811_2.00
Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX
0.827
1.000
FOXP1
M08115_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0481.2
0.827
1.000
FOXP1
M09086_2.00
Homo sapiens
RKAAACAVM
KBTGTTTMY
Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A
0.827
1.000
FOXP1
M09541_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006
0.827
1.000
FOXP1
M10536_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXP1_01
0.827
1.000
FOXP1
M04812_2.00
Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX
0.827
1.000
Foxp2
M00792_2.00
Mus musculus
RTAAACAD
HTGTTTAY
PBM
Weirauch et al.(2013)
pTH1288
0.751
0.901
FOXP2
M05866_2.00
Homo sapiens
RTAAAYAWNN
NNWTRTTTAY
SMiLE-seq
Isakova et al.(2017)
FOXP2
0.751
0.901
FOXP2
M08116_2.00
Homo sapiens
NDGTAAACAVN
NBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0593.1
0.751
0.901
FOXP2
M09089_2.00
Homo sapiens
DGTAAACAV
BTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C
0.751
0.901
Foxp2
M09101_2.00
Mus musculus
NGTAAACAN
NTGTTTACN
Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A
0.751
0.901
FoxP
M03753_2.00
Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT
SELEX
Nitta et al.(2015)
CG16899_1
0.745
0.765
FoxP
M06201_2.00
Drosophila melanogaster
VRTAAACAA
TTGTTTAYB
B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735
0.745
0.765
FoxP
M06202_2.00
Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB
B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905
0.745
0.765
FoxP
M06203_2.00
Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN
B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905
0.745
0.765
Foxj3
M00160_2.00
Mus musculus
NRTAAACAHN
NDTGTTTAYN
PBM
Badis et al.(2009)
Foxj3_0982
0.679
0.469
Foxj3
M01981_2.00
Mus musculus
VNHHAYANN
NNTRTDDNB
PBM
Weirauch et al.(2014)
pTH6591
0.679
0.469
Foxj3
M03055_2.00
Mus musculus
ACGGACACAAT
ATTGTGTCCGT
SELEX
Jolma et al.(2013)
Foxj3_1
0.679
0.469
Foxj3
M03056_2.00
Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
Foxj3_2
0.679
0.469
Foxj3
M03057_2.00
Mus musculus
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_3
0.679
0.469
Foxj3
M03058_2.00
Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_4
0.679
0.469
Foxj3
M09102_2.00
Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A
0.679
0.469
FOXJ3
M03046_2.00
Homo sapiens
RTAAAVAA
TTBTTTAY
SELEX
Jolma et al.(2013)
FOXJ3_1
0.678
0.469
FOXJ3
M03047_2.00
Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_2
0.678
0.469
FOXJ3
M03048_2.00
Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_3
0.678
0.469
FOXJ3
M02736_2.00
Homo sapiens
AAACAATAAACA
TGTTTATTGTTT
SELEX
Jolma et al.(2010)
FOXJ3_dimer
0.678
0.469
FOXJ3
M02737_2.00
Homo sapiens
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2010)
FOXJ3_monomer
0.678
0.469
FOXJ3
M04859_2.00
Homo sapiens
DYGTMAACAH
DTGTTKACRH
SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX
0.678
0.469
FOXJ3
M09098_2.00
Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A
0.678
0.469
FOXJ3
M04860_2.00
Homo sapiens
RYGTMAACAH
DTGTTKACRY
SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX
0.678
0.469
SPU_007644
M01987_2.00
Strongylocentrotus purpuratus
NNHHAYDNN
NNHRTDDNN
PBM
Weirauch et al.(2014)
pTH6497
0.665
0.457
Foxc2
M00796_2.00
Mus musculus
HNNRHMAAYA
TRTTKDYNND
PBM
Weirauch et al.(2013)
pTH3796
0.665
0.432
FOXC2
M03036_2.00
Homo sapiens
NRTMAATATTDWYN
NRWHAATATTKAYN
SELEX
Jolma et al.(2013)
FOXC2_1
0.665
0.432
FOXC2
M03037_2.00
Homo sapiens
RTAAAYAAACA
TGTTTRTTTAY
SELEX
Jolma et al.(2013)
FOXC2_2
0.665
0.432
FOXC2
M03038_2.00
Homo sapiens
WAHRTMAAYAWW
WWTRTTKAYDTW
SELEX
Jolma et al.(2013)
FOXC2_3
0.665
0.432
FOXC2
M04841_2.00
Homo sapiens
NHVNRYMAACAH
DTGTTKRYNBDN
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_1
0.665
0.432
FOXC2
M04842_2.00
Homo sapiens
RHAMAYAAACAH
DTGTTTRTKTDY
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_2
0.665
0.432
FOXC2
M10559_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL14_Q2
0.665
0.432
FOXC2
M04843_2.00
Homo sapiens
NHNNRYMAACAN
NTGTTKRYNNDN
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_1
0.665
0.432
FOXC2
M04844_2.00
Homo sapiens
VHMMAYAAACAN
NTGTTTRTKKDB
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_2
0.665
0.432
FOXK2
M08118_2.00
Homo sapiens
NNRTAAACANN
NNTGTTTAYNN
ChIP-seq
Mathelier et al.(2014)
MA1103.1
0.665
0.444
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000007497
Forkhead
371
454
RPPFTYASLIRQAILESPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEFQKRRPQK
Links
Other
Forkhead
family TFs
Other
Otolemur garnettii
TFs
663 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL003558
Aedes aegypti
AAEL003558
N
AARA001118
Anopheles arabiensis
AARA001118
N
AATE005200
Anopheles atroparvus
AATE005200
N
ACHR008953
Anopheles christyi
ACHR008953
N
ACOM027781
Anopheles coluzzii
ACOM027781
N
ALUE_0000523001
Ascaris lumbricoides
ALUE_0000523001
N
AMAM012119
Anopheles maculatus
AMAM012119
N
AMEC001472
Anopheles melas
AMEC001472
N
AMEM006409
Anopheles merus
AMEM006409
N
ANCCAN_02501
Ancylostoma caninum
ANCCAN_02501
N
ANCCEY_04498
Ancylostoma ceylanicum
ANCCEY_04498
N
ANCDUO_01800
Ancylostoma duodenale
ANCDUO_01800
N
AQUA008305
Anopheles quadriannulatus
AQUA008305
N
ASIM_0001023101
Anisakis simplex
ASIM_0001023101
N
augustus_masked-nMf.1.1.scaf00776-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf00776-processed-gene-0.0
N
BGLB003107
Biomphalaria glabrata
BGLB003107
N
Bm12962
Brugia malayi
Bm12962
N
BTMF_0000819101
Brugia timori
BTMF_0000819101
N
BXY_0681200
Bursaphelenchus xylophilus
BXY_0681200
N
CapteG215623
Capitella teleta
CapteG215623
N
CBG25174
Caenorhabditis briggsae
CBG25174
N
CBN28364
Caenorhabditis brenneri
CBN28364
N
CBN28537
Caenorhabditis brenneri
CBN28537
N
CGI_10012805
Crassostrea gigas
CGI_10012805
N
CGOC_0000560601
Cylicostephanus goldi
CGOC_0000560601
N
CJA30884
Caenorhabditis japonica
CJA30884
N
CJA40030
Caenorhabditis japonica
CJA40030
N
CPIJ006385
Culex quinquefasciatus
CPIJ006385
N
CPIJ018552
Culex quinquefasciatus
CPIJ018552
N
CpipJ_CPIJ006385
Culex pipiens
CpipJ_CPIJ006385
N
CpipJ_CPIJ018552
Culex pipiens
CpipJ_CPIJ018552
N
D918_05751
Trichuris suis
D918_05751
N
DICVIV_09521
Dictyocaulus viviparus
DICVIV_09521
N
EEL_0000436501
Elaeophora elaphi
EEL_0000436501
N
EFV52452
Trichinella spiralis
EFV52452
N
GM26798
Drosophila sechellia
FBgn0181651
N
Hba_16068
Heterorhabditis bacteriophora
Hba_16068
N
HelroG184094
Helobdella robusta
HelroG184094
N
HPBE_0001925501
Heligmosomoides bakeri
HPBE_0001925501
N
HPLM_0001120601
Haemonchus placei
HPLM_0001120601
N
L893_g14196
Steinernema glaseri
L893_g14196
N
LCUP009926
Lucilia cuprina
LCUP009926
N
LOAG_18302
Loa loa
LOAG_18302
N
MDOA007303
Musca domestica
MDOA007303
N
MESCA003372
Megaselia scalaris
MESCA003372
N
nAv.1.0.1.g03640
Acanthocheilonema viteae
nAv.1.0.1.g03640
N
nDi.2.2.2.g01975
Dirofilaria immitis
nDi.2.2.2.g01975
N
nLs.2.1.2.g02280
Litomosoides sigmodontis
nLs.2.1.2.g02280
N
nOo.2.0.1.g06917
Onchocerca ochengi
nOo.2.0.1.g06917
N
nOo.2.0.1.g07994
Onchocerca ochengi
nOo.2.0.1.g07994
N
OFLC_0001322801
Onchocerca flexuosa
OFLC_0001322801
N
PEQ_0000886501
Parascaris equorum
PEQ_0000886501
N
PPA09748
Pristionchus pacificus
PPA09748
N
RPRC014602
Rhodnius prolixus
RPRC014602
N
scaffold58-EXSNAP2012.11
Pristionchus exspectatus
scaffold58-EXSNAP2012.11
N
SVE_1689300
Strongyloides venezuelensis
SVE_1689300
N
TCLT_0000816701
Thelazia callipaeda
TCLT_0000816701
N
TCNE_0000027001
Toxocara canis
TCNE_0000027001
N
TELCIR_13776
Teladorsagia circumcincta
TELCIR_13776
N
TTRE_0000249801
Trichuris trichiura
TTRE_0000249801
N
WBGene00237282
Onchocerca volvulus
WBGene00237282
N
WUBG_04923
Wuchereria bancrofti
WUBG_04923
N