CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
FOXN4
(
Ochotona princeps
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSOPRG00000006537
T186622_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxn4
M01011_2.00
Mus musculus
NNNVACGCNN
NNGCGTBNNN
PBM
Nakagawa et al.(2013)
Foxn4
0.878
0.976
FOXN1
M10531_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WHN_B
0.798
0.893
Foxn1
M01010_2.00
Mus musculus
NAHRCNNNNN
NNNNNGYDTN
PBM
Nakagawa et al.(2013)
Foxn1
0.798
0.881
jumu
M01012_2.00
Drosophila melanogaster
NNNNVACGCN
NGCGTBNNNN
PBM
Nakagawa et al.(2013)
Jumeau
0.777
0.726
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000005994
Forkhead
191
279
PLIYSYSCLIAMALKNSKTGSLPVSEIYSFMKEHFPYFKTAPDGWKNSVRHLSLNKCFEKVEKTGGSSRKGCLWALNLARIDKMEEEMH
Links
Other
Forkhead
family TFs
Other
Ochotona princeps
TFs
199 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL018187
Aedes aegypti
AAEL018187
I
0.811
AALB009566
Anopheles albimanus
AALB009566
I
0.795
Aan_R003515
Calypte anna
Aan_R003515
I
0.798
Aan_R010366
Calypte anna
Aan_R010366
I
0.845
AARA009846
Anopheles arabiensis
AARA009846
I
0.795
AATE005421
Anopheles atroparvus
AATE005421
I
0.795
ACUA002164
Anopheles culicifacies
ACUA002164
I
0.791
ACYPI21591
Acyrthosiphon pisum
ACYPI21591
I
0.818
ADIR003350
Anopheles dirus
ADIR003350
I
0.795
AEPI007299
Anopheles epiroticus
AEPI007299
I
0.794
AFAF001586
Anopheles farauti
AFAF001586
I
0.795
Afo_R000794
Aptenodytes forsteri
Afo_R000794
I
0.845
Afo_R013485
Aptenodytes forsteri
Afo_R013485
I
0.798
AFUN011236
Anopheles funestus
AFUN011236
I
0.791
AGAP003940
Anopheles gambiae
AGAP003940
I
0.795
Alligator_sinensis_CCG002668.1
Alligator sinensis
Alligator_sinensis_CCG002668.1
I
0.798
Alligator_sinensis_CCG016523.1
Alligator sinensis
Alligator_sinensis_CCG016523.1
I
0.845
AMAM019487
Anopheles maculatus
AMAM019487
I
0.791
AMIN000296
Anopheles minimus
AMIN000296
I
0.791
Aqu1.218417
Amphimedon queenslandica
Aqu1.218417
I
0.680
Aqu1.221965
Amphimedon queenslandica
Aqu1.221965
I
0.710
Aqu1.221966
Amphimedon queenslandica
Aqu1.221966
I
0.740
AQUA009136
Anopheles quadriannulatus
AQUA009136
I
0.795
ASIS014250
Anopheles sinensis
ASIS014250
I
0.795
ASTEI00952
Anopheles stephensi
ASTEI00952
I
0.791
BGIBMGA000445
Bombyx mori
BGIBMGA000445
I
0.825
BGLB014390
Biomphalaria glabrata
BGLB014390
I
0.753
Brh_R000146
Buceros rhinoceros
Brh_R000146
I
0.798
Brh_R003679
Buceros rhinoceros
Brh_R003679
I
0.845
Cflo_09362--XP_394749.3_APIME
Camponotus floridanus
Cflo_09362--XP_394749.3_APIME
I
0.814
CGI_10014633
Crassostrea gigas
CGI_10014633
I
0.742
CLEC011741
Cimex lectularius
CLEC011741
I
0.816
Cmyd_10015695
Chelonia mydas
Cmyd_10015695
I
0.837
Cmyd_10016296
Chelonia mydas
Cmyd_10016296
I
0.765
CPIJ001711
Culex quinquefasciatus
CPIJ001711
I
0.795
CpipJ_CPIJ001711
Culex pipiens
CpipJ_CPIJ001711
I
0.795
DAPPUDRAFT_51691
Daphnia pulex
DAPPUDRAFT_51691
I
0.699
ENSACAG00000011719
Anolis carolinensis
ENSACAG00000011719
I
0.824
ENSACAG00000012187
Anolis carolinensis
ENSACAG00000012187
I
0.798
ENSAMEG00000004934
Ailuropoda melanoleuca
ENSAMEG00000004934
I
0.798
ENSAMEG00000016548
Ailuropoda melanoleuca
ENSAMEG00000016548
I
0.845
ENSAMXG00000006838
Astyanax mexicanus
ENSAMXG00000006838
I
0.845
ENSAMXG00000017753
Astyanax mexicanus
ENSAMXG00000017753
I
0.801
ENSAPLG00000002586
Anas platyrhynchos
ENSAPLG00000002586
I
0.845
ENSAPLG00000014618
Anas platyrhynchos
ENSAPLG00000014618
I
0.798
ENSBTAP00000014397-D1
Bos grunniens
ENSBTAP00000014397-D1
I
0.845
ENSBTAP00000017410-D1
Bos grunniens
ENSBTAP00000017410-D1
I
0.798
ENSCSAG00000002781
Chlorocebus sabaeus
ENSCSAG00000002781
I
0.845
ENSCSAG00000007275
Chlorocebus sabaeus
ENSCSAG00000007275
I
0.798
ENSCSAVG00000004000
Ciona savignyi
ENSCSAVG00000004000
I
0.733
ENSFALG00000006460
Ficedula albicollis
ENSFALG00000006460
I
0.798
ENSFALG00000008767
Ficedula albicollis
ENSFALG00000008767
I
0.845
ENSGALG00000003654
Gallus gallus
ENSGALG00000003654
I
0.798
ENSGMOG00000002294
Gadus morhua
ENSGMOG00000002294
I
0.813
ENSGMOG00000012022
Gadus morhua
ENSGMOG00000012022
I
0.845
ENSLACG00000011453
Latimeria chalumnae
ENSLACG00000011453
I
0.845
ENSLAFG00000031464
Loxodonta africana
ENSLAFG00000031464
I
0.813
ENSLOCG00000000236
Lepisosteus oculatus
ENSLOCG00000000236
I
0.845
ENSLOCG00000004428
Lepisosteus oculatus
ENSLOCG00000004428
I
0.845
ENSLOCG00000005491
Lepisosteus oculatus
ENSLOCG00000005491
I
0.715
ENSMEUG00000015975
Macropus eugenii
ENSMEUG00000015975
I
0.845
ENSMMUG00000020375
Macaca mulatta
ENSMMUG00000020375
I
0.845
ENSMPUG00000003606
Mustela putorius furo
ENSMPUG00000003606
I
0.845
ENSMPUG00000014265
Mustela putorius furo
ENSMPUG00000014265
I
0.798
ENSNLEG00000001602
Nomascus leucogenys
ENSNLEG00000001602
I
0.845
ENSNLEG00000002304
Nomascus leucogenys
ENSNLEG00000002304
I
0.798
ENSOANG00000014185
Ornithorhynchus anatinus
ENSOANG00000014185
I
0.798
ENSOARG00000016041
Ovis aries
ENSOARG00000016041
I
0.845
ENSOARG00000018638
Ovis aries
ENSOARG00000018638
I
0.798
ENSONIG00000008179
Oreochromis niloticus
ENSONIG00000008179
I
0.814
ENSONIG00000013504
Oreochromis niloticus
ENSONIG00000013504
I
0.853
ENSORLG00000008113
Oryzias latipes
ENSORLG00000008113
I
0.814
ENSP00000226247
Macaca fascicularis
ENSP00000226247
I
0.798
ENSP00000299162
Macaca fascicularis
ENSP00000299162
I
0.845
ENSPANG00000019523
Papio anubis
ENSPANG00000019523
I
0.845
ENSPANG00000023451
Papio anubis
ENSPANG00000023451
I
0.798
ENSPFOG00000006570
Poecilia formosa
ENSPFOG00000006570
I
0.814
ENSPFOG00000013538
Poecilia formosa
ENSPFOG00000013538
I
0.870
ENSPMAG00000004307
Petromyzon marinus
ENSPMAG00000004307
I
0.797
ENSPPYG00000004931
Pongo abelii
ENSPPYG00000004931
I
0.845
ENSPPYG00000008096
Pongo abelii
ENSPPYG00000008096
I
0.798
ENSPSIG00000004744
Pelodiscus sinensis
ENSPSIG00000004744
I
0.845
ENSPSIG00000009226
Pelodiscus sinensis
ENSPSIG00000009226
I
0.814
ENSSARG00000006773
Sorex araneus
ENSSARG00000006773
I
0.798
ENSSHAG00000013650
Sarcophilus harrisii
ENSSHAG00000013650
I
0.798
ENSSSCG00000009936
Sus scrofa
ENSSSCG00000009936
I
0.845
ENSSSCG00000022921
Sus scrofa
ENSSSCG00000022921
I
0.798
ENSSTOG00000028800
Ictidomys tridecemlineatus
ENSSTOG00000028800
I
0.845
ENSSTOG00000028981
Ictidomys tridecemlineatus
ENSSTOG00000028981
I
0.798
ENSVPAG00000011699
Vicugna pacos
ENSVPAG00000011699
I
0.367
ENSXMAG00000007879
Xiphophorus maculatus
ENSXMAG00000007879
I
0.853
ENSXMAG00000011786
Xiphophorus maculatus
ENSXMAG00000011786
I
0.814
estExt_fgenesh2_pg.C_1860025
Branchiostoma floridae
estExt_fgenesh2_pg.C_1860025
I
0.840
e_gw.490.9.1
Branchiostoma floridae
e_gw.490.9.1
I
0.712
fgenesh2_pg.scaffold_129000050
Branchiostoma floridae
fgenesh2_pg.scaffold_129000050
I
0.840
FOXN1
Bos taurus
ENSBTAG00000013095
I
0.798
FOXN1
Canis familiaris
ENSCAFG00000018709
I
0.798
FOXN1
Callithrix jacchus
ENSCJAG00000012705
I
0.798
FOXN1
Cavia porcellus
ENSCPOG00000009810
I
0.798
foxn1
Danio rerio
ENSDARG00000011879
I
0.814
FOXN1
Dasypus novemcinctus
ENSDNOG00000006144
I
0.798
Foxn1
Dipodomys ordii
ENSDORG00000015116
I
0.798
FOXN1
Equus caballus
ENSECAG00000010691
I
0.798
FOXN1
Erinaceus europaeus
ENSEEUG00000006629
I
0.789
FOXN1
Echinops telfairi
ENSETEG00000015002
I
0.789
FOXN1
Felis catus
ENSFCAG00000008268
I
0.798
FOXN1
Homo sapiens
ENSG00000109101
D
0.798
foxn1
Gasterosteus aculeatus
ENSGACG00000008619
I
0.814
FOXN1
Gorilla gorilla
ENSGGOG00000009682
I
0.798
FOXN1
Loxodonta africana
ENSLAFG00000014501
I
0.798
FOXN1
Meleagris gallopavo
ENSMGAG00000005734
I
0.798
FOXN1
Microcebus murinus
ENSMICG00000016795
I
0.798
FOXN1
Myotis lucifugus
ENSMLUG00000012353
I
0.798
FOXN1
Macaca mulatta
ENSMMUG00000021975
I
0.798
FOXN1
Monodelphis domestica
ENSMODG00000019251
I
0.798
Foxn1
Mus musculus
ENSMUSG00000002057
D
0.798
FOXN1
Oryctolagus cuniculus
ENSOCUG00000013779
I
0.798
FOXN1
Otolemur garnettii
ENSOGAG00000007093
I
0.798
FOXN1
Ochotona princeps
ENSOPRG00000012389
I
0.798
FOXN1
Procavia capensis
ENSPCAG00000010796
I
0.798
FOXN1
Pan troglodytes
ENSPTRG00000008920
I
0.798
FOXN1
Pteropus vampyrus
ENSPVAG00000002892
I
0.798
Foxn1
Rattus norvegicus
ENSRNOG00000010870
I
0.798
FOXN1
Tupaia belangeri
ENSTBEG00000007940
I
0.798
FOXN1
Taeniopygia guttata
ENSTGUG00000005999
I
0.798
FOXN1
Tursiops truncatus
ENSTTRG00000004014
I
0.798
FOXN4
Bos taurus
ENSBTAG00000010847
I
0.845
FOXN4
Canis familiaris
ENSCAFG00000010915
I
0.845
FOXN4
Callithrix jacchus
ENSCJAG00000010010
I
0.777
FOXN4
Cavia porcellus
ENSCPOG00000000942
I
0.845
foxn4
Danio rerio
ENSDARG00000010591
I
0.845
FOXN4
Dasypus novemcinctus
ENSDNOG00000015606
I
0.829
FOXN4
Felis catus
ENSFCAG00000003124
I
0.845
FOXN4
Homo sapiens
ENSG00000139445
I
0.845
foxn4
Gasterosteus aculeatus
ENSGACG00000009215
I
0.853
FoxN4
Gallus gallus
ENSGALG00000005062
I
0.827
FOXN4
Gorilla gorilla
ENSGGOG00000009323
I
0.845
FOXN4
Meleagris gallopavo
ENSMGAG00000006116
I
0.845
Foxn4
Mus musculus
ENSMUSG00000042002
D
0.878
FOXN4
Ornithorhynchus anatinus
ENSOANG00000008810
I
0.845
FOXN4
Oryctolagus cuniculus
ENSOCUG00000005185
I
0.870
FOXN4
Otolemur garnettii
ENSOGAG00000007455
I
0.845
FOXN4
Oryzias latipes
ENSORLG00000007587
I
0.853
FOXN4
Pan troglodytes
ENSPTRG00000005421
I
0.845
FOXN4
Pteropus vampyrus
ENSPVAG00000007463
I
0.845
Foxn4
Rattus norvegicus
ENSRNOG00000000691
I
0.841
FOXN4
Tupaia belangeri
ENSTBEG00000005233
I
0.845
FOXN4
Taeniopygia guttata
ENSTGUG00000007235
I
0.845
foxn4
Tetraodon nigroviridis
ENSTNIG00000015894
I
0.853
foxn4
Takifugu rubripes
ENSTRUG00000015456
I
0.853
FOXN4
Tursiops truncatus
ENSTTRG00000006397
I
0.845
foxn4
Xenopus tropicalis
XB-GENE-981086
I
0.845
foxn4.S
Xenopus laevis
XB-GENE-981090
I
0.873
GA17887
Drosophila pseudoobscura
FBgn0077896
I
0.777
GA25156
Drosophila pseudoobscura
FBgn0246538
I
0.753
GB41890
Apis mellifera
GB41890
I
0.854
GD18690
Drosophila simulans
FBgn0190211
I
0.777
GE26032
Drosophila yakuba
FBgn0243075
I
0.777
GF17528
Drosophila ananassae
FBgn0094546
I
0.777
Gfo_R003176
Geospiza fortis
Gfo_R003176
I
0.845
Gfo_R011440
Geospiza fortis
Gfo_R011440
I
0.798
GG17529
Drosophila erecta
FBgn0109754
I
0.777
GH19127
Drosophila grimshawi
FBgn0126594
I
0.777
GI23584
Drosophila mojavensis
FBgn0146310
I
0.777
GJ23559
Drosophila virilis
FBgn0210656
I
0.777
GK11545
Drosophila willistoni
FBgn0213556
I
0.777
GM23879
Drosophila sechellia
FBgn0178744
I
0.777
gw.612.6.1
Branchiostoma floridae
gw.612.6.1
I
0.712
HHAL008872-PA
Halyomorpha halys
HHAL008872-PA
I
0.814
ISCW008179
Ixodes scapularis
ISCW008179
I
0.804
jumu
Drosophila melanogaster
FBgn0015396
D
0.777
KGM_21935
Danaus plexippus
KGM_21935
I
0.825
L798_10143
Zootermopsis nevadensis
L798_10143
I
0.872
LCUP000947
Lucilia cuprina
LCUP000947
I
0.779
LDEC004155
Leptinotarsa decemlineata
LDEC004155
I
0.786
LLOJ002533
Lutzomyia longipalpis
LLOJ002533
I
0.795
LotgiG77849
Lottia gigantea
LotgiG77849
I
0.753
MDOA003678
Musca domestica
MDOA003678
I
0.795
Myotis_brandtii_Foxn1_10015981
Myotis brandtii
Myotis_brandtii_Foxn1_10015981
I
0.798
Myotis_brandtii_FOXN4_10027419
Myotis brandtii
Myotis_brandtii_FOXN4_10027419
I
0.804
NEMVEDRAFT_v1g121754
Nematostella vectensis
NEMVEDRAFT_v1g121754
I
0.756
Ogr03484
Ophisaurus gracilis
Ogr03484
I
0.798
Ogr14394
Ophisaurus gracilis
Ogr14394
I
0.821
PHUM047550
Pediculus humanus
PHUM047550
I
0.774
PPAI007934
Phlebotomus papatasi
PPAI007934
I
0.795
Pvit_00420
Pogona vitticeps
Pvit_00420
I
0.753
Pvit_02436
Pogona vitticeps
Pvit_02436
I
0.843
RPRC003475
Rhodnius prolixus
RPRC003475
I
0.810
Sakowv30034418m.g
Saccoglossus kowalevskii
Sakowv30034418m.g
I
0.838
SINV24088
Solenopsis invicta
SINV24088
I
0.837
SMAR013946
Strigamia maritima
SMAR013946
I
0.773
SPU_002320
Strongylocentrotus purpuratus
SPU_002320
I
0.667
Tal_R000657
Tyto alba
Tal_R000657
I
0.845
Tal_R011069
Tyto alba
Tal_R011069
I
0.798
TC012532
Tribolium castaneum
TC012532
I
0.776
TriadG51743
Trichoplax adhaerens
TriadG51743
I
0.719
XP_002166457.1
Hydra magnipapillata
XP_002166457.1
I
0.748
XP_002937190
Xenopus tropicalis
XP_002937190
I
0.798
YQE_08440
Dendroctonus ponderosae
YQE_08440
I
0.799