CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSHAG00000018566
(
Sarcophilus harrisii
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSSHAG00000018566
T187048_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxp2
M00792_2.00
Mus musculus
RTAAACAD
HTGTTTAY
PBM
Weirauch et al.(2013)
pTH1288
0.829
1.000
FOXP2
M05866_2.00
Homo sapiens
RTAAAYAWNN
NNWTRTTTAY
SMiLE-seq
Isakova et al.(2017)
FOXP2
0.829
1.000
FOXP2
M08116_2.00
Homo sapiens
NDGTAAACAVN
NBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0593.1
0.829
1.000
FOXP2
M09089_2.00
Homo sapiens
DGTAAACAV
BTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C
0.829
1.000
Foxp2
M09101_2.00
Mus musculus
NGTAAACAN
NTGTTTACN
Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A
0.829
1.000
FOXP1
M00836_2.00
Homo sapiens
NRTMAACANN
NNTGTTKAYN
PBM
Gabut et al.(2011)
pEX0123
0.751
0.901
FOXP1
M00837_2.00
Homo sapiens
DGTAAACAA
TTGTTTACH
PBM
Gabut et al.(2011)
pEX0124
0.751
0.901
FOXP1
M01976_2.00
Homo sapiens
RTAAACAA
TTGTTTAY
PBM
Weirauch et al.(2014)
pTH5656
0.751
0.901
Foxp1
M00793_2.00
Mus musculus
NRTMAAYAN
NTRTTKAYN
PBM
Weirauch et al.(2013)
pTH3855
0.751
0.901
FOXP1
M04811_2.00
Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX
0.751
0.901
FOXP1
M08115_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0481.2
0.751
0.901
FOXP1
M09086_2.00
Homo sapiens
RKAAACAVM
KBTGTTTMY
Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A
0.751
0.901
FOXP1
M09541_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006
0.751
0.901
FOXP1
M10536_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXP1_01
0.751
0.901
FOXP1
M04812_2.00
Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX
0.751
0.901
FoxP
M03753_2.00
Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT
SELEX
Nitta et al.(2015)
CG16899_1
0.725
0.728
FoxP
M06201_2.00
Drosophila melanogaster
VRTAAACAA
TTGTTTAYB
B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735
0.725
0.728
FoxP
M06202_2.00
Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB
B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905
0.725
0.728
FoxP
M06203_2.00
Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN
B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905
0.725
0.728
SPU_025010
M01988_2.00
Strongylocentrotus purpuratus
NNVNHHAYAN
NTRTDDNBNN
PBM
Weirauch et al.(2014)
pTH6641
0.667
0.457
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSHAP00000021937
Forkhead
487
571
RPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEYQKRRSQKI
ENSSHAP00000021938
Forkhead
434
518
RPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEYQKRRSQKI
Links
Other
Forkhead
family TFs
Other
Sarcophilus harrisii
TFs
396 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R010750
Calypte anna
Aan_R010750
I
Aan_R014790
Calypte anna
Aan_R014790
N
Afo_R009725
Aptenodytes forsteri
Afo_R009725
N
Afo_R010549
Aptenodytes forsteri
Afo_R010549
I
Alligator_sinensis_CCG014201.1
Alligator sinensis
Alligator_sinensis_CCG014201.1
N
Brh_R001107
Buceros rhinoceros
Brh_R001107
N
Brh_R007745
Buceros rhinoceros
Brh_R007745
I
CABZ01077402.1
Danio rerio
ENSDARG00000101645
N
Cmyd_10008461
Chelonia mydas
Cmyd_10008461
I
ENSAMEG00000011926
Ailuropoda melanoleuca
ENSAMEG00000011926
N
ENSAMXG00000021027
Astyanax mexicanus
ENSAMXG00000021027
N
ENSAPLG00000006054
Anas platyrhynchos
ENSAPLG00000006054
I
ENSAPLG00000012837
Anas platyrhynchos
ENSAPLG00000012837
N
ENSBTAP00000019581-D1
Bos grunniens
ENSBTAP00000019581-D1
N
ENSCJAG00000036263
Callithrix jacchus
ENSCJAG00000036263
N
ENSFALG00000010237
Ficedula albicollis
ENSFALG00000010237
N
ENSFALG00000011806
Ficedula albicollis
ENSFALG00000011806
I
ENSGALG00000020522
Gallus gallus
ENSGALG00000020522
I
ENSLACG00000016455
Latimeria chalumnae
ENSLACG00000016455
I
ENSMMUG00000006501
Macaca mulatta
ENSMMUG00000006501
I
ENSMMUP00000039187
Macaca fascicularis
ENSMMUP00000039187
N
ENSMPUG00000017495
Mustela putorius furo
ENSMPUG00000017495
N
ENSOARG00000020232
Ovis aries
ENSOARG00000020232
I
ENSONIG00000015523
Oreochromis niloticus
ENSONIG00000015523
I
ENSPANG00000002677
Papio anubis
ENSPANG00000002677
N
ENSPFOG00000011050
Poecilia formosa
ENSPFOG00000011050
I
ENSPFOG00000011745
Poecilia formosa
ENSPFOG00000011745
N
ENSPSIG00000015590
Pelodiscus sinensis
ENSPSIG00000015590
I
ENSSTOG00000020113
Ictidomys tridecemlineatus
ENSSTOG00000020113
N
ENSTGUG00000006600
Taeniopygia guttata
ENSTGUG00000006600
I
ENSTGUG00000007004
Taeniopygia guttata
ENSTGUG00000007004
N
ENSXMAG00000003748
Xiphophorus maculatus
ENSXMAG00000003748
I
ENSXMAG00000010424
Xiphophorus maculatus
ENSXMAG00000010424
N
Gfo_R003999
Geospiza fortis
Gfo_R003999
N
Gfo_R011942
Geospiza fortis
Gfo_R011942
I
myrf
Xenopus tropicalis
XB-GENE-1020968
I
MYRF
Meleagris gallopavo
ENSMGAG00000004733
I
MYRF
Oryzias latipes
ENSORLG00000006459
I
Myrfl
Mus musculus
ENSMUSG00000034057
N
Myrfl
Rattus norvegicus
ENSRNOG00000021833
N
MYRFL
Ornithorhynchus anatinus
ENSOANG00000005958
N
MYRFL
Monodelphis domestica
ENSMODG00000020385
N
MYRFL
Bos taurus
ENSBTAG00000014829
N
MYRFL
Cavia porcellus
ENSCPOG00000013850
N
MYRFL
Dasypus novemcinctus
ENSDNOG00000044488
N
MYRFL
Felis catus
ENSFCAG00000031998
N
MYRFL
Homo sapiens
ENSG00000166268
N
MYRFL
Gallus gallus
ENSGALG00000019352
N
MYRFL
Loxodonta africana
ENSLAFG00000001286
N
MYRFL
Oryctolagus cuniculus
ENSOCUG00000002982
N
MYRFL
Meleagris gallopavo
ENSMGAG00000010606
N
MYRFL
Myotis lucifugus
ENSMLUG00000009508
N
MYRFL
Otolemur garnettii
ENSOGAG00000028145
N
MYRFL
Anolis carolinensis
ENSACAG00000004738
N
MYRFL
Takifugu rubripes
ENSTRUG00000001490
N
MYRFL
Tetraodon nigroviridis
ENSTNIG00000002871
N
Pvit_15884
Pogona vitticeps
Pvit_15884
I
Tal_R006175
Tyto alba
Tal_R006175
I
Tal_R011346
Tyto alba
Tal_R011346
N