CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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daf-16
(
Caenorhabditis elegans
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
WBGene00000912
T188799_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
daf-16
M01989_2.00
Caenorhabditis elegans
NNRWMAAYAN
NTRTTKWYNN
PBM
Weirauch et al.(2014)
pTH8995
(Direct)
(Direct)
daf-16
M10574_2.00
Caenorhabditis elegans
RNHGTAAACAANHN
NDNTTGTTTACDNY
Transfac
Matys et al.(2006)
N$DAF16_01
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxo4
M00794_2.00
Mus musculus
NNRWMAAYAN
NTRTTKWYNN
PBM
Weirauch et al.(2013)
pTH3731
0.779
0.711
Foxo4
M09107_2.00
Mus musculus
MVWAAACAA
TTGTTTWBK
Misc
Kulakovskiy et al.(2013)
FOXO4_MOUSE.H11MO.0.C
0.779
0.711
Foxo3
M00797_2.00
Mus musculus
RTMAACAN
NTGTTKAY
PBM
Weirauch et al.(2013)
pTH3749
0.759
0.759
FOXO3
M03019_2.00
Homo sapiens
GTAAACATGTTTAC
GTAAACATGTTTAC
SELEX
Jolma et al.(2013)
FOXO3_1
0.759
0.759
FOXO3
M03020_2.00
Homo sapiens
GTAAACAW
WTGTTTAC
SELEX
Jolma et al.(2013)
FOXO3_2
0.759
0.759
FOXO3
M03021_2.00
Homo sapiens
KTTCCCCACAC
GTGTGGGGAAM
SELEX
Jolma et al.(2013)
FOXO3_3
0.759
0.759
FOXO3
M04813_2.00
Homo sapiens
HHCCCCACACN
NGTGTGGGGDD
SELEX
Yin et al.(2017)
FOXO3_eDBD_HT-SELEX
0.759
0.759
FOXO3
M09087_2.00
Homo sapiens
DGTAAACAVV
BBTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXO3_HUMAN.H11MO.0.B
0.759
0.759
Foxo3
M09110_2.00
Mus musculus
DGTAAACAVV
BBTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXO3_MOUSE.H11MO.0.B
0.759
0.759
FOXO3
M10537_2.00
Homo sapiens
WAHGTAAACAAVND
HNBTTGTTTACDWW
Transfac
Matys et al.(2006)
V$FOXO3_01
0.759
0.759
FOXO3
M10538_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO3A_Q1
0.759
0.759
FOXO3
M10539_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO3A_Q3
0.759
0.759
FOXO3
M04814_2.00
Homo sapiens
NHCCCCACACV
BGTGTGGGGDN
SELEX
Yin et al.(2017)
FOXO3_eDBD_Methyl-HT-SELEX
0.759
0.759
Foxo6
M00798_2.00
Mus musculus
NNNNHHRYDN
NHRYDDNNNN
PBM
Weirauch et al.(2013)
pTH3477
0.755
0.687
FOXO6
M03049_2.00
Homo sapiens
GTAAACATGTTTAC
GTAAACATGTTTAC
SELEX
Jolma et al.(2013)
FOXO6_1
0.755
0.687
FOXO6
M03050_2.00
Homo sapiens
GTAAACA
TGTTTAC
SELEX
Jolma et al.(2013)
FOXO6_2
0.755
0.687
FOXO6
M03051_2.00
Homo sapiens
TTTCCCCACACGMC
GKCGTGTGGGGAAA
SELEX
Jolma et al.(2013)
FOXO6_3
0.755
0.687
Foxo1
M00795_2.00
Mus musculus
NRWMAACAN
NTGTTKWYN
PBM
Weirauch et al.(2013)
pTH3846
0.747
0.711
FOXO1
M03022_2.00
Homo sapiens
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2013)
FOXO1_1
0.747
0.711
FOXO1
M03023_2.00
Homo sapiens
GTAAACATGTTTAY
RTAAACATGTTTAC
SELEX
Jolma et al.(2013)
FOXO1_2
0.747
0.711
FOXO1
M03024_2.00
Homo sapiens
TTTCCCCACACD
HGTGTGGGGAAA
SELEX
Jolma et al.(2013)
FOXO1_3
0.747
0.711
Foxo1
M08122_2.00
Mus musculus
DGTAAACARSH
DSYTGTTTACH
ChIP-seq
Mathelier et al.(2014)
MA0480.1
0.747
0.711
FOXO1
M09091_2.00
Homo sapiens
NRDAAACAVVVN
NBBBTGTTTHYN
Misc
Kulakovskiy et al.(2013)
FOXO1_HUMAN.H11MO.0.A
0.747
0.711
Foxo1
M09108_2.00
Mus musculus
RWMAACAVVN
NBBTGTTKWY
Misc
Kulakovskiy et al.(2013)
FOXO1_MOUSE.H11MO.0.A
0.747
0.711
Foxo1
M09547_2.00
Mus musculus
GTAAACAV
BTGTTTAC
Misc
Heinz et al.(2010)
RAW-Foxo1_Fan_et_al.
0.747
0.711
FOXO1
M10549_2.00
Homo sapiens
NVWAAACAMN
NKTGTTTWBN
Transfac
Matys et al.(2006)
V$FOXO1_01
0.747
0.711
FOXO1
M10550_2.00
Homo sapiens
VNHGTAAACAANHH
DDNTTGTTTACDNB
Transfac
Matys et al.(2006)
V$FOXO1_02
0.747
0.711
FOXO1
M10551_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO1_03
0.747
0.711
FOXO1
M10552_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO1_04
0.747
0.711
FOXO1
M10553_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO1A_Q3
0.747
0.711
FOXO1
M10554_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO1A_Q5
0.747
0.711
foxo
M06198_2.00
Drosophila melanogaster
YVRWAAACA
TGTTTWYBR
B1H
Zhu et al.(2011)
foxo_SANGER_10_FBgn0038197
0.739
0.771
For this family, TFs with SR scores >
0.664
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01989_2.00
Forkhead
50
140
GNMSYAELITTAIMASPEKRLTLAQVYEWMVQNVPYFRDKGDSNSSAGWKNSIRHNLSLHSRFMRIQNEGAGKSSWWVINPDAKPGRNPRR
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
R13H8.1a
Forkhead
165
255
GEESYSDIIAKALESAPDGRLKLNEIYQWFSDNIPYFGERSSPEEAAGWKNSIRHNLSLHSRFMRIQNEGAGKSSWWVINPDAKPGRNPRR
R13H8.1b.1
Forkhead
143
233
GNMSYAELITTAIMASPEKRLTLAQVYEWMVQNVPYFRDKGDSNSSAGWKNSIRHNLSLHSRFMRIQNEGAGKSSWWVINPDAKPGRNPRR
R13H8.1b.2
Forkhead
143
233
GNMSYAELITTAIMASPEKRLTLAQVYEWMVQNVPYFRDKGDSNSSAGWKNSIRHNLSLHSRFMRIQNEGAGKSSWWVINPDAKPGRNPRR
R13H8.1c.1
Forkhead
145
235
GNMSYAELITTAIMASPEKRLTLAQVYEWMVQNVPYFRDKGDSNSSAGWKNSIRHNLSLHSRFMRIQNEGAGKSSWWVINPDAKPGRNPRR
R13H8.1c.2
Forkhead
145
235
GNMSYAELITTAIMASPEKRLTLAQVYEWMVQNVPYFRDKGDSNSSAGWKNSIRHNLSLHSRFMRIQNEGAGKSSWWVINPDAKPGRNPRR
R13H8.1d
Forkhead
122
212
GNMSYAELITTAIMASPEKRLTLAQVYEWMVQNVPYFRDKGDSNSSAGWKNSIRHNLSLHSRFMRIQNEGAGKSSWWVINPDAKPGRNPRR
R13H8.1f
Forkhead
152
242
GNMSYAELITTAIMASPEKRLTLAQVYEWMVQNVPYFRDKGDSNSSAGWKNSIRHNLSLHSRFMRIQNEGAGKSSWWVINPDAKPGRNPRR
R13H8.1g
Forkhead
1
49
MREMSTKNNSIRHNLSLHSRFMRIQNEGAGKSSWWVINPDAKPGRNPRR
R13H8.1h
Forkhead
176
266
GNMSYAELITTAIMASPEKRLTLAQVYEWMVQNVPYFRDKGDSNSSAGWKNSIRHNLSLHSRFMRIQNEGAGKSSWWVINPDAKPGRNPRR
Links
Other
Forkhead
family TFs
Other
Caenorhabditis elegans
TFs
284 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_026230
Acremonium chrysogenum
ACRE_026230
N
BBA_09641
Beauveria bassiana
BBA_09641
N
CCM_03378
Cordyceps militaris
CCM_03378
N
CFIO01_12453
Colletotrichum fioriniae
CFIO01_12453
N
CGGC5_5314
Colletotrichum gloeosporioides
CGGC5_5314
N
CH063_06178
Colletotrichum higginsianum
CH063_06178
N
CHGG_06395
Chaetomium globosum
CHGG_06395
N
CMQ_3062
Grosmannia clavigera
CMQ_3062
N
Cob_05014
Colletotrichum orbiculare
Cob_05014
N
CPUR_05147
Claviceps purpurea
CPUR_05147
N
CSUB01_03564
Colletotrichum sublineola
CSUB01_03564
N
estExt_fgenesh3_kg.C_20127
Neurospora discreta
estExt_fgenesh3_kg.C_20127
N
F503_02282
Ophiostoma piceae uamh
F503_02282
N
FFUJ_06005
Fusarium fujikuroi
FFUJ_06005
N
FOXG_08872
Fusarium oxysporum
FOXG_08872
N
GGTG_00991
Gaeumannomyces graminis
GGTG_00991
N
GLRG_02520
Colletotrichum graminicola
GLRG_02520
N
GMDG_07896
Pseudogymnoascus destructans
GMDG_07896
N
HMPREF1624_04956
Sporothrix schenckii
HMPREF1624_04956
N
MAJ_03898
Metarhizium majus
MAJ_03898
N
MBM_01057
Marssonina brunnea
MBM_01057
N
MBR_08021
Metarhizium brunneum
MBR_08021
N
MGG_03711
Magnaporthe oryzae
MGG_03711
N
MGU_03571
Metarhizium guizhouense
MGU_03571
N
MYCTH_2313964
Myceliophthora thermophila
MYCTH_2313964
N
NCU02142
Neurospora crassa
NCU02142
N
NEUTE1DRAFT_89140
Neurospora tetrasperma
NEUTE1DRAFT_89140
N
OIDMADRAFT_174720
Oidiodendron maius
OIDMADRAFT_174720
N
OIDMADRAFT_62312
Oidiodendron maius
OIDMADRAFT_62312
N
OIDMADRAFT_62375
Oidiodendron maius
OIDMADRAFT_62375
N
PFICI_10667
Pestalotiopsis fici
PFICI_10667
N
PODANS_1_17550
Podospora anserina
PODANS_1_17550
N
S40288_03133
Stachybotrys chartarum
S40288_03133
N
SAPIO_CDS7458
Scedosporium apiospermum
SAPIO_CDS7458
N
SMAC_05040
Sordaria macrospora
SMAC_05040
N
THITE_2111974
Thielavia terrestris
THITE_2111974
N
TRIATDRAFT_127907
Trichoderma atroviride
TRIATDRAFT_127907
N
TRIREDRAFT_122523
Trichoderma reesei
TRIREDRAFT_122523
N
UV8b_1816
Ustilaginoidea virens
UV8b_1816
N
V499_02967
Pseudogymnoascus pannorum
V499_02967
N
V499_03539
Pseudogymnoascus pannorum
V499_03539
N
VHEMI02872
Torrubiella hemipterigena
VHEMI02872
N
X797_006320
Metarhizium robertsii
X797_006320
N