CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cflo_06973--XP_625198.2_APIME
(
Camponotus floridanus
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
Cflo_06973--XP_625198.2_APIME
T188981_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXN3
M01227_2.00
Homo sapiens
GTAAACAA
TTGTTTAC
PBM
Lambert et al.(2019)
pTH11266
0.787
0.788
NEMVEDRAFT_v1g67209
M01016_2.00
Nematostella vectensis
NNDWHRMNNN
NNNKYDWHNN
PBM
Nakagawa et al.(2013)
FoxN2-3_Nvec
0.723
0.753
CHES-1-like
M01013_2.00
Drosophila melanogaster
NNNHHRMNNN
NNNKYDDNNN
PBM
Nakagawa et al.(2013)
CHES-1-like
0.717
0.788
CHES-1-like
M03745_2.00
Drosophila melanogaster
DHRTAAACAAW
WTTGTTTAYDH
SELEX
Nitta et al.(2015)
CHES-1-like_1
0.717
0.788
CHES-1-like
M03746_2.00
Drosophila melanogaster
GCGTCNNYRTAAACAAW
WTTGTTTAYRNNGACGC
SELEX
Nitta et al.(2015)
CHES-1-like_2
0.717
0.788
CHES-1-like
M03747_2.00
Drosophila melanogaster
WNVGCGTCHWNGACGCNNW
WNNGCGTCNWDGACGCBNW
SELEX
Nitta et al.(2015)
CHES-1-like_3
0.717
0.788
CHES-1-like
M03748_2.00
Drosophila melanogaster
DNGCGTCHNNDGACGCNN
NNGCGTCHNNDGACGCNH
SELEX
Nitta et al.(2015)
CHES-1-like_4
0.717
0.788
CHES-1-like
M03749_2.00
Drosophila melanogaster
HNGCGTCHNGACGCNN
NNGCGTCNDGACGCND
SELEX
Nitta et al.(2015)
CHES-1-like_5
0.717
0.788
FOXN2
M01007_2.00
Homo sapiens
NNGACGCNN
NNGCGTCNN
PBM
Nakagawa et al.(2013)
FOXN2
0.717
0.776
FOXN2
M04835_2.00
Homo sapiens
NNGCGTSNNNNNSACGCNN
NNGCGTSNNNNNSACGCNN
SELEX
Yin et al.(2017)
FOXN2_eDBD_HT-SELEX
0.717
0.776
FOXN2
M04836_2.00
Homo sapiens
NGCATMRBNNYKATGCH
DGCATMRNNVYKATGCN
SELEX
Yin et al.(2017)
FOXN2_eDBD_Methyl-HT-SELEX
0.717
0.776
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cflo_06973--XP_625198.2_APIME
Forkhead
246
333
KPPYSFSCLIFMAIEDSPVKALPVKEVYAWILDHFPYFRNAPTGWKNSVRHNLSLNKCFRKVEKAPNLGKGSLWMVDAQYRPNLIQAL
Links
Other
Forkhead
family TFs
Other
Camponotus floridanus
TFs
193 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB06533.1
Alternaria brassicicola
AB06533.1
N
0.000
COCC4DRAFT_46985
Bipolaris maydis
COCC4DRAFT_46985
N
0.000
COCCADRAFT_82274
Bipolaris zeicola
COCCADRAFT_82274
N
0.000
COCMIDRAFT_8999
Bipolaris oryzae
COCMIDRAFT_8999
N
0.000
COCSADRAFT_25239
Bipolaris sorokiniana
COCSADRAFT_25239
N
0.000
COCVIDRAFT_37014
Bipolaris victoriae
COCVIDRAFT_37014
N
0.000
col-26
Neurospora crassa
NCU07788
D
0.000
CTHT_0068480
Chaetomium thermophilum
CTHT_0068480
I
0.000
DOTSEDRAFT_68376
Dothistroma septosporum
DOTSEDRAFT_68376
I
0.000
estExt_fgenesh1_pg.C_40234
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_40234
N
0.000
estExt_fgenesh1_pg.C_chr_10960
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_10960
I
0.000
estExt_Genewise1.C_12176
Mycosphaerella fijiensis
estExt_Genewise1.C_12176
I
0.000
estExt_Genewise1Plus.C_140234
Neurospora discreta
estExt_Genewise1Plus.C_140234
I
0.000
LEMA_P115290.1
Leptosphaeria maculans
LEMA_P115290.1
N
0.000
M437DRAFT_67933
Aureobasidium melanogenum
M437DRAFT_67933
I
0.000
M438DRAFT_155623
Aureobasidium pullulans
M438DRAFT_155623
I
0.000
MPH_08875
Macrophomina phaseolina
MPH_08875
N
0.000
MYCFIDRAFT_127068
Pseudocercospora fijiensis
MYCFIDRAFT_127068
I
0.000
Mycgr3G107320
Zymoseptoria tritici
Mycgr3G107320
I
0.000
NEUTE1DRAFT_59081
Neurospora tetrasperma
NEUTE1DRAFT_59081
I
0.000
PTT_02079
Pyrenophora teres
PTT_02079
N
0.000
PV09_00811
Verruconis gallopava
PV09_00811
N
0.000
SEPMUDRAFT_146091
Sphaerulina musiva
SEPMUDRAFT_146091
I
0.000
SETTUDRAFT_174289
Setosphaeria turcica
SETTUDRAFT_174289
N
0.000
SMAC_08231
Sordaria macrospora
SMAC_08231
I
0.000
UCREL1_10245
Eutypa lata
UCREL1_10245
I
0.000
UCRNP2_458
Neofusicoccum parvum
UCRNP2_458
N
0.000