CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

LDEC015330 *(Leptinotarsa decemlineata)* Forkhead
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00250 (Forkhead)	IPR001766	LDEC015330	T189564_2.00	Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
FOXF1 M10529_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FKHL5_Q3	0.853	0.965
FOXF1 M10530_2.00	Homo sapiens	YRHATAAACAHNB	VNDTGTTTATDYR	Transfac Matys et al.(2006) V$HFH8_01	0.853	0.965
FOXF2 M02680_2.00	Homo sapiens	BNHNSRTAAACAHN	NDTGTTTAYSNDNV	SELEX Mathelier et al.(2014) MA0030.1	0.811	0.942
FOXF2 M10548_2.00	Homo sapiens	BNHNBRTAAACAHNVN	NBNDTGTTTAYVNDNV	Transfac Matys et al.(2006) V$FREAC2_01	0.811	0.942
bin M03752_2.00	Drosophila melanogaster	HTAATGTAAACAAW	WTTGTTTACATTAD	SELEX Nitta et al.(2015) bin_1	0.765	0.686
bin M06199_2.00	Drosophila melanogaster	TAAACARVGA	TCBYTGTTTA	B1H Zhu et al.(2011) bin_FlyReg_FBgn0045759	0.765	0.686
bin M06200_2.00	Drosophila melanogaster	RTAAACA	TGTTTAY	B1H Zhu et al.(2011) bin_SANGER_5_FBgn0045759	0.765	0.686
FOXE1 M04845_2.00	Homo sapiens	BVYTAWRYAAACADN	NHTGTTTRYWTARBV	SELEX Yin et al.(2017) FOXE1_eDBD_HT-SELEX	0.752	0.628
FOXE1 M04846_2.00	Homo sapiens	BVYTAARYAAACAWH	DWTGTTTRYTTARBV	SELEX Yin et al.(2017) FOXE1_eDBD_Methyl-HT-SELEX	0.752	0.628
FOXD2 M03042_2.00	Homo sapiens	NRTMAAYRTTWDYN	NRHWAAYRTTKAYN	SELEX Jolma et al.(2013) FOXD2_1	0.745	0.640
FOXD2 M03043_2.00	Homo sapiens	RTAAAYA	TRTTTAY	SELEX Jolma et al.(2013) FOXD2_2	0.745	0.640
FOXD2 M04851_2.00	Homo sapiens	HWASAATAAYAWWN	NWWTRTTATTSTWD	SELEX Yin et al.(2017) FOXD2_eDBD_HT-SELEX_1	0.745	0.640
FOXD2 M04852_2.00	Homo sapiens	VYWANRTAAAYAH	DTRTTTAYNTWRB	SELEX Yin et al.(2017) FOXD2_eDBD_HT-SELEX_2	0.745	0.640
FOXD1 M02681_2.00	Homo sapiens	GTAAACAD	HTGTTTAC	SELEX Mathelier et al.(2014) MA0031.1	0.745	0.640
Foxd1 M10570_2.00	Mus musculus	SYWAWGTAAACADHVN	NBDHTGTTTACWTWRS	Transfac Matys et al.(2006) V$FREAC4_01	0.745	0.640
FOXD1 M10567_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FREAC4_02	0.745	0.640
FOXD2 M04853_2.00	Homo sapiens	HWACAATAACRWWN	NWWYGTTATTGTWD	SELEX Yin et al.(2017) FOXD2_eDBD_Methyl-HT-SELEX_1	0.745	0.640
FOXD2 M04854_2.00	Homo sapiens	RYTRNGTMAACRD	HYGTTKACNYARY	SELEX Yin et al.(2017) FOXD2_eDBD_Methyl-HT-SELEX_2	0.745	0.640
Gm5294 M01984_2.00	Mus musculus	NNKRTAAACANN	NNTGTTTAYMNN	PBM Weirauch et al.(2014) pTH3802	0.742	0.535
FOXD4L4 M10564_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXD4L4_01	0.742	0.616
FOXD3 M03044_2.00	Homo sapiens	NRTMAAYRTTWDYN	NRHWAAYRTTKAYN	SELEX Jolma et al.(2013) FOXD3_1	0.738	0.628
FOXD3 M03045_2.00	Homo sapiens	RTAAAYA	TRTTTAY	SELEX Jolma et al.(2013) FOXD3_2	0.738	0.628
FOXD3 M04855_2.00	Homo sapiens	VHWRHRTAMACW	WGTKTAYDYWDB	SELEX Yin et al.(2017) FOXD3_eDBD_HT-SELEX	0.738	0.628
Foxd3 M09114_2.00	Mus musculus	DVNWRDRNAAACAVN	NBTGTTTNYHYWNBH	Misc Kulakovskiy et al.(2013) FOXD3_MOUSE.H11MO.0.C	0.738	0.628
FOXD3 M10565_2.00	Homo sapiens	RADHAAAYAWWH	DWWTRTTTDHTY	Transfac Matys et al.(2006) V$FOXD3_01	0.738	0.628
FOXD3 M10566_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HFH2_Q5	0.738	0.628
FOXD3 M04856_2.00	Homo sapiens	VYWRHRTAAACW	WGTTTAYDYWRB	SELEX Yin et al.(2017) FOXD3_eDBD_Methyl-HT-SELEX	0.738	0.628
foxe3 M01228_2.00	Xenopus tropicalis	WNNVHHMAYW	WRTKDDBNNW	PBM Lambert et al.(2019) pTH9824	0.738	0.616
fd64A M06197_2.00	Drosophila melanogaster	KVWAAACA	TGTTTWBM	B1H Zhu et al.(2011) fd64A_SANGER_5_FBgn0004895	0.732	0.570
Foxl1 M00164_2.00	Mus musculus	NNNRTMAAYA	TRTTKAYNNN	PBM Badis et al.(2009) Foxl1_2809	0.731	0.651
FOXL1 M03034_2.00	Homo sapiens	RTAAACA	TGTTTAY	SELEX Jolma et al.(2013) FOXL1_1	0.731	0.640
FOXL1 M03035_2.00	Homo sapiens	NRTAAAYAAAYAN	NTRTTTRTTTAYN	SELEX Jolma et al.(2013) FOXL1_2	0.731	0.640
FOXL1 M10558_2.00	Homo sapiens	DHNVHATAAAYAHNNN	NNNDTRTTTATDBNDH	Transfac Matys et al.(2006) V$FREAC7_01	0.731	0.640
fd59A M03739_2.00	Drosophila melanogaster	HWAWRTAAACAWW	WWTGTTTAYWTWD	SELEX Nitta et al.(2015) fd59A_1	0.722	0.605
fd59A M03740_2.00	Drosophila melanogaster	WWAVAATAACAHN	NDTGTTATTBTWW	SELEX Nitta et al.(2015) fd59A_2	0.722	0.605
fd59A M03741_2.00	Drosophila melanogaster	YWRWRTAAAYAHH	DDTRTTTAYWYWR	SELEX Nitta et al.(2015) fd59A_3	0.722	0.605
fd59A M03742_2.00	Drosophila melanogaster	MWACAAYAAYAHW	WDTRTTRTTGTWK	SELEX Nitta et al.(2015) fd59A_4	0.722	0.605
let-381 M00664_2.00	Caenorhabditis elegans	RTAAACAW	WTGTTTAY	PBM Narasimhan et al.(2015) pTH9057	0.711	0.663
FOXC1 M00257_2.00	Homo sapiens	NNNVHHAAYA	TRTTDDBNNN	PBM Barrera et al.(2016) FOXC1_REF	0.691	0.651
Foxc2 M00796_2.00	Mus musculus	HNNRHMAAYA	TRTTKDYNND	PBM Weirauch et al.(2013) pTH3796	0.691	0.651
Foxc1 M01982_2.00	Mus musculus	HNNRHMAAYA	TRTTKDYNND	PBM Weirauch et al.(2014) pTH2673	0.691	0.651
FOXC1 M03013_2.00	Homo sapiens	AWRTAAAYAAAYA	TRTTTRTTTAYWT	SELEX Jolma et al.(2013) FOXC1_1	0.691	0.651
FOXC1 M03014_2.00	Homo sapiens	NRWMAATATTKWYN	NRWMAATATTKWYN	SELEX Jolma et al.(2013) FOXC1_2	0.691	0.651
FOXC1 M03015_2.00	Homo sapiens	WRWRTMAAYAW	WTRTTKAYWYW	SELEX Jolma et al.(2013) FOXC1_3	0.691	0.651
FOXC2 M03036_2.00	Homo sapiens	NRTMAATATTDWYN	NRWHAATATTKAYN	SELEX Jolma et al.(2013) FOXC2_1	0.691	0.651
FOXC2 M03037_2.00	Homo sapiens	RTAAAYAAACA	TGTTTRTTTAY	SELEX Jolma et al.(2013) FOXC2_2	0.691	0.651
FOXC2 M03038_2.00	Homo sapiens	WAHRTMAAYAWW	WWTRTTKAYDTW	SELEX Jolma et al.(2013) FOXC2_3	0.691	0.651
Foxc1 M03059_2.00	Mus musculus	RTAAAYAAACA	TGTTTRTTTAY	SELEX Jolma et al.(2013) Foxc1_1	0.691	0.651
Foxc1 M03060_2.00	Mus musculus	RTAAACA	TGTTTAY	SELEX Jolma et al.(2013) Foxc1_2	0.691	0.651
FOXC2 M04841_2.00	Homo sapiens	NHVNRYMAACAH	DTGTTKRYNBDN	SELEX Yin et al.(2017) FOXC2_eDBD_HT-SELEX_1	0.691	0.651
FOXC2 M04842_2.00	Homo sapiens	RHAMAYAAACAH	DTGTTTRTKTDY	SELEX Yin et al.(2017) FOXC2_eDBD_HT-SELEX_2	0.691	0.651
FOXC1 M09083_2.00	Homo sapiens	SBWAWRTAAACADHN	NDHTGTTTAYWTWVS	Misc Kulakovskiy et al.(2013) FOXC1_HUMAN.H11MO.0.C	0.691	0.651
Foxc1 M09111_2.00	Mus musculus	SBWAWRTAAACADHN	NDHTGTTTAYWTWVS	Misc Kulakovskiy et al.(2013) FOXC1_MOUSE.H11MO.0.C	0.691	0.651
FOXC2 M10559_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FKHL14_Q2	0.691	0.651
FOXC1 M10525_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXC1_Q4	0.691	0.651
FOXC1 M10526_2.00	Homo sapiens	TSTTTATTTACDBNVN	NBNVHGTAAATAAASA	Transfac Matys et al.(2006) V$FREAC3_01	0.691	0.651
FOXC2 M04843_2.00	Homo sapiens	NHNNRYMAACAN	NTGTTKRYNNDN	SELEX Yin et al.(2017) FOXC2_eDBD_Methyl-HT-SELEX_1	0.691	0.651
FOXC2 M04844_2.00	Homo sapiens	VHMMAYAAACAN	NTGTTTRTKKDB	SELEX Yin et al.(2017) FOXC2_eDBD_Methyl-HT-SELEX_2	0.691	0.651
FOXC1 M00253_2.00	Homo sapiens	NNHATAAWHAN	NTDWTTATDNN	PBM Barrera et al.(2016) FOXC1_F112S	0.691	0.640
FOXC1 M00255_2.00	Homo sapiens	NRTATATWHNNN	NNNDWATATAYN	PBM Barrera et al.(2016) FOXC1_L130F	0.691	0.640
FOXC1 M00256_2.00	Homo sapiens	NNNNWWTYAMAWN	NWTKTRAWWNNNN	PBM Barrera et al.(2016) FOXC1_P79L	0.691	0.640
FOXC1 M00258_2.00	Homo sapiens	NNNAMAAYANN	NNTRTTKTNNN	PBM Barrera et al.(2016) FOXC1_S131L	0.691	0.640
FOXC1 M00259_2.00	Homo sapiens	RTAAACAW	WTGTTTAY	PBM Barrera et al.(2016) FOXC1_S82T	0.691	0.640
FOXL2 M04847_2.00	Homo sapiens	NVBGHMAACAH	DTGTTKDCVBN	SELEX Yin et al.(2017) FOXL2_FL_HT-SELEX	0.675	0.628
Foxl2 M09112_2.00	Mus musculus	DWDWRTAAACA	TGTTTAYWHWH	Misc Kulakovskiy et al.(2013) FOXL2_MOUSE.H11MO.0.C	0.675	0.628
FOXL2 M10560_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXL2_Q2	0.675	0.628
FOXL2 M10561_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXL2_Q5	0.675	0.628
FOXL2 M04848_2.00	Homo sapiens	HVCGWMAACAH	DTGTTKWCGBD	SELEX Yin et al.(2017) FOXL2_FL_Methyl-HT-SELEX	0.675	0.628
FOXC1 M00254_2.00	Homo sapiens	RRTAAACANN	NNTGTTTAYY	PBM Barrera et al.(2016) FOXC1_I126M	0.675	0.651
For this family, TFs with SR scores > 0.664* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
LDEC015330-PA	Forkhead	83	172	KPPYSYIALIVMAIQHSPTKRLTLSEIYTFLQQRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSF

Links
Other Forkhead family TFs
Other *Leptinotarsa decemlineata* TFs

1047 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AAEL005892	Aedes aegypti	AAEL005892	N
AALB010202	Anopheles albimanus	AALB010202	N
Aan_R012372	Calypte anna	Aan_R012372	N
Aan_R014419	Calypte anna	Aan_R014419	N
AATE010533	Anopheles atroparvus	AATE010533	N
ACEP13151	Atta cephalotes	ACEP13151	N
ACUA017310	Anopheles culicifacies	ACUA017310	N
AFAF012856	Anopheles farauti	AFAF012856	N
Afo_R003052	Aptenodytes forsteri	Afo_R003052	N
AGAP010516	Anopheles gambiae	AGAP010516	N
Alligator_sinensis_CCG008692.1	Alligator sinensis	Alligator_sinensis_CCG008692.1	N
AMEM011646	Anopheles merus	AMEM011646	N
ASTEI07114	Anopheles stephensi	ASTEI07114	N
Brh_R010325	Buceros rhinoceros	Brh_R010325	N
CapteG227287	Capitella teleta	CapteG227287	N
Cflo_01591--XP_624136.2_APIME	Camponotus floridanus	Cflo_01591--XP_624136.2_APIME	N
CGI_10028872	Crassostrea gigas	CGI_10028872	N
Cmyd_10009010	Chelonia mydas	Cmyd_10009010	N
DAPPUDRAFT_51670	Daphnia pulex	DAPPUDRAFT_51670	N
ENSAMEG00000012079	Ailuropoda melanoleuca	ENSAMEG00000012079	N
ENSAMXG00000021081	Astyanax mexicanus	ENSAMXG00000021081	N
ENSCSAG00000006700	Chlorocebus sabaeus	ENSCSAG00000006700	N
ENSCSAVG00000003922	Ciona savignyi	ENSCSAVG00000003922	N
ENSDORG00000010750	Dipodomys ordii	ENSDORG00000010750	N
ENSECAG00000009173	Equus caballus	ENSECAG00000009173	N
ENSFALG00000003343	Ficedula albicollis	ENSFALG00000003343	N
ENSGMOG00000007617	Gadus morhua	ENSGMOG00000007617	N
ENSLACG00000011483	Latimeria chalumnae	ENSLACG00000011483	N
ENSLOCG00000009209	Lepisosteus oculatus	ENSLOCG00000009209	N
ENSMEUG00000009287	Macropus eugenii	ENSMEUG00000009287	N
ENSMICG00000002011	Microcebus murinus	ENSMICG00000002011	N
ENSMPUG00000006868	Mustela putorius furo	ENSMPUG00000006868	N
ENSNLEG00000016813	Nomascus leucogenys	ENSNLEG00000016813	N
ENSOCUG00000023005	Oryctolagus cuniculus	ENSOCUG00000023005	N
ENSONIG00000015208	Oreochromis niloticus	ENSONIG00000015208	N
ENSOPRG00000011725	Ochotona princeps	ENSOPRG00000011725	N
ENSP00000364405	Macaca fascicularis	ENSP00000364405	N
ENSP00000364405-D1	Bos grunniens	ENSP00000364405-D1	N
ENSPANG00000024635	Papio anubis	ENSPANG00000024635	N
ENSPFOG00000007837	Poecilia formosa	ENSPFOG00000007837	N
ENSPPYG00000019416	Pongo abelii	ENSPPYG00000019416	N
ENSPSIG00000011709	Pelodiscus sinensis	ENSPSIG00000011709	N
ENSSSCG00000010933	Sus scrofa	ENSSSCG00000010933	N
ENSSTOG00000005655	Ictidomys tridecemlineatus	ENSSTOG00000005655	N
ENSXMAG00000015989	Xiphophorus maculatus	ENSXMAG00000015989	N
estExt_fgenesh2_pg.C_2650031	Branchiostoma floridae	estExt_fgenesh2_pg.C_2650031	N
GB46246	Apis mellifera	GB46246	N
Gfo_R009072	Geospiza fortis	Gfo_R009072	N
ISCW000539	Ixodes scapularis	ISCW000539	N
L798_11919	Zootermopsis nevadensis	L798_11919	N
LDEC003543	Leptinotarsa decemlineata	LDEC003543	N
LotgiG165679	Lottia gigantea	LotgiG165679	N
Myotis_brandtii_Znf367_10015819	Myotis brandtii	Myotis_brandtii_Znf367_10015819	N
NEMVEDRAFT_v1g106775	Nematostella vectensis	NEMVEDRAFT_v1g106775	N
NV15465	Nasonia vitripennis	NV15465	N
Pvit_09074	Pogona vitticeps	Pvit_09074	N
Sakowv30026002m.g	Saccoglossus kowalevskii	Sakowv30026002m.g	N
SINV17846	Solenopsis invicta	SINV17846	N
TC016055	Tribolium castaneum	TC016055	N
TriadG15889	Trichoplax adhaerens	TriadG15889	N
YQE_09141	Dendroctonus ponderosae	YQE_09141	N
zf(c2h2)-76	Ciona intestinalis	ENSCING00000023622	N
Zfp367	Mus musculus	ENSMUSG00000044934	N
Zfp367	Rattus norvegicus	ENSRNOG00000027234	N
znf367	Gasterosteus aculeatus	ENSGACG00000006715	N
ZNF367	Cavia porcellus	ENSCPOG00000001515	N
znf367	Danio rerio	ENSDARG00000021086	N
ZNF367	Dasypus novemcinctus	ENSDNOG00000035249	N
ZNF367	Anolis carolinensis	ENSACAG00000012929	N
ZNF367	Echinops telfairi	ENSETEG00000018547	N
ZNF367	Felis catus	ENSFCAG00000015587	N
znf367	Xenopus tropicalis	XB-GENE-986040	N
ZNF367	Otolemur garnettii	ENSOGAG00000004337	N
znf367	Oryzias latipes	ENSORLG00000003923	N
ZNF367	Monodelphis domestica	ENSMODG00000000499	N
ZNF367	Macaca mulatta	ENSMMUG00000007996	N
ZNF367	Myotis lucifugus	ENSMLUG00000017279	N
ZNF367	Meleagris gallopavo	ENSMGAG00000006781	N
ZNF367	Homo sapiens	ENSG00000165244	N
ZNF367	Vicugna pacos	ENSVPAG00000002182	N
ZNF367	Gallus gallus	ENSGALG00000012629	N
ZNF367	Gorilla gorilla	ENSGGOG00000012699	N
ZNF367	Loxodonta africana	ENSLAFG00000010427	N
ZNF367	Bos taurus	ENSBTAG00000006587	N
ZNF367	Canis familiaris	ENSCAFG00000001213	N
ZNF367	Choloepus hoffmanni	ENSCHOG00000008195	N
ZNF367	Pan troglodytes	ENSPTRG00000021153	N
ZNF367	Pteropus vampyrus	ENSPVAG00000007651	N
ZNF367	Sorex araneus	ENSSARG00000000827	N
ZNF367	Callithrix jacchus	ENSCJAG00000012580	N
ZNF367	Tupaia belangeri	ENSTBEG00000002215	N
ZNF367	Taeniopygia guttata	ENSTGUG00000000513	N
znf367	Tetraodon nigroviridis	ENSTNIG00000016674	N
znf367	Takifugu rubripes	ENSTRUG00000015325	N
znf367.S	Xenopus laevis	XB-GENE-986041	N

LDEC015330 (Leptinotarsa decemlineata) Forkhead

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1047 Related TFs

LDEC015330 **(Leptinotarsa decemlineata)
Forkhead**