CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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augustus_masked-nMf.1.1.scaf00690-processed-gene-0.2
(
Meloidogyne floridensis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
augustus_masked-nMf.1.1.scaf00690-processed-gene-0.2
T190336_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXD3
M03044_2.00
Homo sapiens
NRTMAAYRTTWDYN
NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD3_1
0.778
0.802
FOXD3
M03045_2.00
Homo sapiens
RTAAAYA
TRTTTAY
SELEX
Jolma et al.(2013)
FOXD3_2
0.778
0.802
FOXD3
M04855_2.00
Homo sapiens
VHWRHRTAMACW
WGTKTAYDYWDB
SELEX
Yin et al.(2017)
FOXD3_eDBD_HT-SELEX
0.778
0.802
Foxd3
M09114_2.00
Mus musculus
DVNWRDRNAAACAVN
NBTGTTTNYHYWNBH
Misc
Kulakovskiy et al.(2013)
FOXD3_MOUSE.H11MO.0.C
0.778
0.802
FOXD3
M10565_2.00
Homo sapiens
RADHAAAYAWWH
DWWTRTTTDHTY
Transfac
Matys et al.(2006)
V$FOXD3_01
0.778
0.802
FOXD3
M10566_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HFH2_Q5
0.778
0.802
FOXD3
M04856_2.00
Homo sapiens
VYWRHRTAAACW
WGTTTAYDYWRB
SELEX
Yin et al.(2017)
FOXD3_eDBD_Methyl-HT-SELEX
0.778
0.802
FOXD2
M03042_2.00
Homo sapiens
NRTMAAYRTTWDYN
NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD2_1
0.753
0.791
FOXD2
M03043_2.00
Homo sapiens
RTAAAYA
TRTTTAY
SELEX
Jolma et al.(2013)
FOXD2_2
0.753
0.791
FOXD2
M04851_2.00
Homo sapiens
HWASAATAAYAWWN
NWWTRTTATTSTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_1
0.753
0.791
FOXD2
M04852_2.00
Homo sapiens
VYWANRTAAAYAH
DTRTTTAYNTWRB
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_2
0.753
0.791
FOXD1
M02681_2.00
Homo sapiens
GTAAACAD
HTGTTTAC
SELEX
Mathelier et al.(2014)
MA0031.1
0.753
0.791
Foxd1
M10570_2.00
Mus musculus
SYWAWGTAAACADHVN
NBDHTGTTTACWTWRS
Transfac
Matys et al.(2006)
V$FREAC4_01
0.753
0.791
FOXD1
M10567_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FREAC4_02
0.753
0.791
FOXD2
M04853_2.00
Homo sapiens
HWACAATAACRWWN
NWWYGTTATTGTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_1
0.753
0.791
FOXD2
M04854_2.00
Homo sapiens
RYTRNGTMAACRD
HYGTTKACNYARY
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_2
0.753
0.791
FOXD4L4
M10564_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXD4L4_01
0.748
0.767
FOXE1
M04845_2.00
Homo sapiens
BVYTAWRYAAACADN
NHTGTTTRYWTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_HT-SELEX
0.742
0.674
FOXE1
M04846_2.00
Homo sapiens
BVYTAARYAAACAWH
DWTGTTTRYTTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_Methyl-HT-SELEX
0.742
0.674
fd59A
M03739_2.00
Drosophila melanogaster
HWAWRTAAACAWW
WWTGTTTAYWTWD
SELEX
Nitta et al.(2015)
fd59A_1
0.734
0.779
fd59A
M03740_2.00
Drosophila melanogaster
WWAVAATAACAHN
NDTGTTATTBTWW
SELEX
Nitta et al.(2015)
fd59A_2
0.734
0.779
fd59A
M03741_2.00
Drosophila melanogaster
YWRWRTAAAYAHH
DDTRTTTAYWYWR
SELEX
Nitta et al.(2015)
fd59A_3
0.734
0.779
fd59A
M03742_2.00
Drosophila melanogaster
MWACAAYAAYAHW
WDTRTTRTTGTWK
SELEX
Nitta et al.(2015)
fd59A_4
0.734
0.779
foxe3
M01228_2.00
Xenopus tropicalis
WNNVHHMAYW
WRTKDDBNNW
PBM
Lambert et al.(2019)
pTH9824
0.729
0.744
FOXL1
M03034_2.00
Homo sapiens
RTAAACA
TGTTTAY
SELEX
Jolma et al.(2013)
FOXL1_1
0.728
0.640
FOXL1
M03035_2.00
Homo sapiens
NRTAAAYAAAYAN
NTRTTTRTTTAYN
SELEX
Jolma et al.(2013)
FOXL1_2
0.728
0.640
FOXL1
M10558_2.00
Homo sapiens
DHNVHATAAAYAHNNN
NNNDTRTTTATDBNDH
Transfac
Matys et al.(2006)
V$FREAC7_01
0.728
0.640
Foxl1
M00164_2.00
Mus musculus
NNNRTMAAYA
TRTTKAYNNN
PBM
Badis et al.(2009)
Foxl1_2809
0.728
0.628
Gm5294
M01984_2.00
Mus musculus
NNKRTAAACANN
NNTGTTTAYMNN
PBM
Weirauch et al.(2014)
pTH3802
0.713
0.616
FOXF2
M02680_2.00
Homo sapiens
BNHNSRTAAACAHN
NDTGTTTAYSNDNV
SELEX
Mathelier et al.(2014)
MA0030.1
0.708
0.570
FOXF2
M10548_2.00
Homo sapiens
BNHNBRTAAACAHNVN
NBNDTGTTTAYVNDNV
Transfac
Matys et al.(2006)
V$FREAC2_01
0.708
0.570
fd64A
M06197_2.00
Drosophila melanogaster
KVWAAACA
TGTTTWBM
B1H
Zhu et al.(2011)
fd64A_SANGER_5_FBgn0004895
0.705
0.686
FOXL2
M04847_2.00
Homo sapiens
NVBGHMAACAH
DTGTTKDCVBN
SELEX
Yin et al.(2017)
FOXL2_FL_HT-SELEX
0.703
0.628
Foxl2
M09112_2.00
Mus musculus
DWDWRTAAACA
TGTTTAYWHWH
Misc
Kulakovskiy et al.(2013)
FOXL2_MOUSE.H11MO.0.C
0.703
0.628
FOXL2
M10560_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXL2_Q2
0.703
0.628
FOXL2
M10561_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXL2_Q5
0.703
0.628
FOXL2
M04848_2.00
Homo sapiens
HVCGWMAACAH
DTGTTKWCGBD
SELEX
Yin et al.(2017)
FOXL2_FL_Methyl-HT-SELEX
0.703
0.628
FOXF1
M10529_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL5_Q3
0.703
0.570
FOXF1
M10530_2.00
Homo sapiens
YRHATAAACAHNB
VNDTGTTTATDYR
Transfac
Matys et al.(2006)
V$HFH8_01
0.703
0.570
Foxc2
M00796_2.00
Mus musculus
HNNRHMAAYA
TRTTKDYNND
PBM
Weirauch et al.(2013)
pTH3796
0.688
0.616
FOXC2
M03036_2.00
Homo sapiens
NRTMAATATTDWYN
NRWHAATATTKAYN
SELEX
Jolma et al.(2013)
FOXC2_1
0.688
0.616
FOXC2
M03037_2.00
Homo sapiens
RTAAAYAAACA
TGTTTRTTTAY
SELEX
Jolma et al.(2013)
FOXC2_2
0.688
0.616
FOXC2
M03038_2.00
Homo sapiens
WAHRTMAAYAWW
WWTRTTKAYDTW
SELEX
Jolma et al.(2013)
FOXC2_3
0.688
0.616
FOXC2
M04841_2.00
Homo sapiens
NHVNRYMAACAH
DTGTTKRYNBDN
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_1
0.688
0.616
FOXC2
M04842_2.00
Homo sapiens
RHAMAYAAACAH
DTGTTTRTKTDY
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_2
0.688
0.616
FOXC2
M10559_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL14_Q2
0.688
0.616
FOXC2
M04843_2.00
Homo sapiens
NHNNRYMAACAN
NTGTTKRYNNDN
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_1
0.688
0.616
FOXC2
M04844_2.00
Homo sapiens
VHMMAYAAACAN
NTGTTTRTKKDB
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_2
0.688
0.616
FOXC1
M00257_2.00
Homo sapiens
NNNVHHAAYA
TRTTDDBNNN
PBM
Barrera et al.(2016)
FOXC1_REF
0.671
0.605
Foxc1
M01982_2.00
Mus musculus
HNNRHMAAYA
TRTTKDYNND
PBM
Weirauch et al.(2014)
pTH2673
0.671
0.605
FOXC1
M03013_2.00
Homo sapiens
AWRTAAAYAAAYA
TRTTTRTTTAYWT
SELEX
Jolma et al.(2013)
FOXC1_1
0.671
0.605
FOXC1
M03014_2.00
Homo sapiens
NRWMAATATTKWYN
NRWMAATATTKWYN
SELEX
Jolma et al.(2013)
FOXC1_2
0.671
0.605
FOXC1
M03015_2.00
Homo sapiens
WRWRTMAAYAW
WTRTTKAYWYW
SELEX
Jolma et al.(2013)
FOXC1_3
0.671
0.605
Foxc1
M03059_2.00
Mus musculus
RTAAAYAAACA
TGTTTRTTTAY
SELEX
Jolma et al.(2013)
Foxc1_1
0.671
0.605
Foxc1
M03060_2.00
Mus musculus
RTAAACA
TGTTTAY
SELEX
Jolma et al.(2013)
Foxc1_2
0.671
0.605
FOXC1
M09083_2.00
Homo sapiens
SBWAWRTAAACADHN
NDHTGTTTAYWTWVS
Misc
Kulakovskiy et al.(2013)
FOXC1_HUMAN.H11MO.0.C
0.671
0.605
Foxc1
M09111_2.00
Mus musculus
SBWAWRTAAACADHN
NDHTGTTTAYWTWVS
Misc
Kulakovskiy et al.(2013)
FOXC1_MOUSE.H11MO.0.C
0.671
0.605
FOXC1
M10525_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXC1_Q4
0.671
0.605
FOXC1
M10526_2.00
Homo sapiens
TSTTTATTTACDBNVN
NBNVHGTAAATAAASA
Transfac
Matys et al.(2006)
V$FREAC3_01
0.671
0.605
FOXC1
M00253_2.00
Homo sapiens
NNHATAAWHAN
NTDWTTATDNN
PBM
Barrera et al.(2016)
FOXC1_F112S
0.671
0.593
FOXC1
M00255_2.00
Homo sapiens
NRTATATWHNNN
NNNDWATATAYN
PBM
Barrera et al.(2016)
FOXC1_L130F
0.671
0.593
FOXC1
M00256_2.00
Homo sapiens
NNNNWWTYAMAWN
NWTKTRAWWNNNN
PBM
Barrera et al.(2016)
FOXC1_P79L
0.671
0.593
FOXC1
M00258_2.00
Homo sapiens
NNNAMAAYANN
NNTRTTKTNNN
PBM
Barrera et al.(2016)
FOXC1_S131L
0.671
0.593
FOXC1
M00259_2.00
Homo sapiens
RTAAACAW
WTGTTTAY
PBM
Barrera et al.(2016)
FOXC1_S82T
0.671
0.593
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
augustus_masked-nMf.1.1.scaf00690-processed-gene-0.2-mRNA-1
Forkhead
105
194
KPPFSYIALISMAIVNSKQRRLTLSQICDFIMDKFEYYREKFPAWQNSIRHNLSLNDCFVKCPREPGNPGKGNYWALDPAAEDMFDNGSF
Links
Other
Forkhead
family TFs
Other
Meloidogyne floridensis
TFs
1002 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_07437
Capronia coronata
A1O1_07437
I
0.000
A1O3_08281
Capronia epimyces
A1O3_08281
I
0.000
A1O5_04770
Cladophialophora psammophila
A1O5_04770
N
0.000
A1O9_02783
Exophiala aquamarina
A1O9_02783
I
0.000
ACLA_097790
Aspergillus clavatus
CADACLAG00009233
I
0.000
ACRE_041000
Acremonium chrysogenum
ACRE_041000
I
0.000
AFUA_6G02690
Aspergillus fumigatus
CADAFUAG00000511
I
0.000
ANIA_08741
Aspergillus nidulans
CADANIAG00006327
I
0.000
ARB_01804
Arthroderma benhamiae
ARB_01804
I
0.000
ATEG_07186
Aspergillus terreus
CADATEAG00001686
I
0.000
BAUCODRAFT_124151
Baudoinia compniacensis
BAUCODRAFT_124151
I
0.000
Bcin09g04000
Botrytis cinerea
Bcin09g04000
I
0.000
BDDG_05952
Blastomyces dermatitidis
BDDG_05952
I
0.000
CADAFLAG00008834
Aspergillus flavus
CADAFLAG00008834
I
0.000
CADANGAG00010257
Aspergillus niger
CADANGAG00010257
I
0.000
CADAORAG00011314
Aspergillus oryzae
CADAORAG00011314
I
0.000
CFIO01_02960
Colletotrichum fioriniae
CFIO01_02960
I
0.000
CH063_07646
Colletotrichum higginsianum
CH063_07646
I
0.000
CHGG_06306
Chaetomium globosum
CHGG_06306
I
0.000
CIMG_10049
Coccidioides immitis
CIMG_10049
I
0.000
CMQ_5498
Grosmannia clavigera
CMQ_5498
I
0.000
Cob_05779
Colletotrichum orbiculare
Cob_05779
I
0.000
COCC4DRAFT_123864
Bipolaris maydis
COCC4DRAFT_123864
I
0.000
COCCADRAFT_81622
Bipolaris zeicola
COCCADRAFT_81622
I
0.000
COCMIDRAFT_103312
Bipolaris oryzae
COCMIDRAFT_103312
I
0.000
COCSADRAFT_207272
Bipolaris sorokiniana
COCSADRAFT_207272
I
0.000
COCVIDRAFT_91551
Bipolaris victoriae
COCVIDRAFT_91551
I
0.000
CPC735_011910
Coccidioides posadasii
CPC735_011910
I
0.000
CSUB01_11666
Colletotrichum sublineola
CSUB01_11666
I
0.000
CTHT_0014240
Chaetomium thermophilum
CTHT_0014240
I
0.000
DOTSEDRAFT_68386
Dothistroma septosporum
DOTSEDRAFT_68386
I
0.000
EPUS_00352
Endocarpon pusillum
EPUS_00352
I
0.000
estExt_fgenesh1_pg.C_20162
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_20162
I
0.000
estExt_fgenesh3_kg.C_70245
Neurospora discreta
estExt_fgenesh3_kg.C_70245
I
0.000
EURHEDRAFT_451933
Aspergillus ruber
EURHEDRAFT_451933
I
0.000
EV44_g5656
Erysiphe necator
EV44_g5656
I
0.000
e_gw1.00855.183.1
Aspergillus carbonarius
e_gw1.00855.183.1
I
0.000
e_gw1.1.1014.1
Mycosphaerella fijiensis
e_gw1.1.1014.1
I
0.000
e_gw1.1.4254.1
Mycosphaerella graminicola
e_gw1.1.4254.1
I
0.000
F503_03886
Ophiostoma piceae uamh
F503_03886
I
0.000
FFUJ_04251
Fusarium fujikuroi
FFUJ_04251
I
0.000
fgenesh1_pg.sca_18_chr2_1_0000868
Nectria haematococca
fgenesh1_pg.sca_18_chr2_1_0000868
I
0.000
FGRRES_09410
Fusarium graminearum
FGRRES_09410
I
0.000
FOXG_06083
Fusarium oxysporum
FOXG_06083
I
0.000
FPSE_05112
Fusarium pseudograminearum
FPSE_05112
I
0.000
GGTG_10332
Gaeumannomyces graminis
GGTG_10332
I
0.000
GLRG_07822
Colletotrichum graminicola
GLRG_07822
I
0.000
GMDG_02388
Pseudogymnoascus destructans
GMDG_02388
I
0.000
GSTUM_00004702001
Tuber melanosporum
GSTUM_00004702001
I
0.000
H101_03296
Trichophyton interdigitale
H101_03296
I
0.000
H102_08745
Trichophyton rubrum
H102_08745
I
0.000
H105_08771
Trichophyton soudanense
H105_08771
I
0.000
HMPREF1120_04884
Exophiala dermatitidis
HMPREF1120_04884
I
0.000
HMPREF1541_04620
Cyphellophora europaea
HMPREF1541_04620
I
0.000
HMPREF1624_04682
Sporothrix schenckii
HMPREF1624_04682
I
0.000
LEMA_P041320.1
Leptosphaeria maculans
LEMA_P041320.1
I
0.000
MAC_06655
Metarhizium acridum
MAC_06655
I
0.000
MAJ_03429
Metarhizium majus
MAJ_03429
I
0.000
MANI_000776
Metarhizium anisopliae
MANI_000776
I
0.000
MAPG_02496
Magnaporthe poae
MAPG_02496
I
0.000
MBM_06471
Marssonina brunnea
MBM_06471
I
0.000
MBR_06925
Metarhizium brunneum
MBR_06925
I
0.000
MCYG_03048
Microsporum canis
MCYG_03048
I
0.000
MCYG_03048
Arthroderma otae
MCYG_03048
I
0.000
MGG_12536
Magnaporthe oryzae
MGG_12536
I
0.000
MGYG_00220
Microsporum gypseum
MGYG_00220
I
0.000
MPH_04617
Macrophomina phaseolina
MPH_04617
I
0.000
MYCFIDRAFT_209985
Pseudocercospora fijiensis
MYCFIDRAFT_209985
I
0.000
Mycgr3G31676
Zymoseptoria tritici
Mycgr3G31676
I
0.000
MYCTH_2297579
Myceliophthora thermophila
MYCTH_2297579
I
0.000
NCU03184
Neurospora crassa
NCU03184
D
0.000
NechaG76677
Fusarium solani
NechaG76677
I
0.000
NEUTE1DRAFT_126104
Neurospora tetrasperma
NEUTE1DRAFT_126104
I
0.000
NFIA_049000
Neosartorya fischeri
CADNFIAG00005354
I
0.000
OIDMADRAFT_115397
Oidiodendron maius
OIDMADRAFT_115397
I
0.000
PAAG_04503
Paracoccidioides sp lutzii
PAAG_04503
I
0.000
PABG_04286
Paracoccidioides brasiliensis
PABG_04286
I
0.000
Pc22g24110
Penicillium chrysogenum
Pc22g24110
I
0.000
PCH_Pc22g24110
Penicillium rubens
PCH_Pc22g24110
I
0.000
PDE_03425
Penicillium oxalicum
PDE_03425
I
0.000
PDIP_61610
Penicillium digitatum
PDIP_61610
I
0.000
PEX1_012340
Penicillium expansum
PEX1_012340
I
0.000
PFICI_02997
Pestalotiopsis fici
PFICI_02997
I
0.000
PITC_054050
Penicillium italicum
PITC_054050
I
0.000
PMAA_092990
Talaromyces marneffei
PMAA_092990
I
0.000
PMAA_092990
Penicillium marneffei
PMAA_092990
I
0.000
PTRG_05588
Pyrenophora triticirepentis
PTRG_05588
I
0.000
PTT_15591
Pyrenophora teres
PTT_15591
I
0.000
PV05_10243
Exophiala xenobiotica
PV05_10243
N
0.000
PV06_09652
Exophiala oligosperma
PV06_09652
I
0.000
PV07_07040
Cladophialophora immunda
PV07_07040
N
0.000
PV09_00302
Verruconis gallopava
PV09_00302
I
0.000
PV10_05881
Exophiala mesophila
PV10_05881
I
0.000
PV11_09518
Exophiala sideris
PV11_09518
I
0.000
PVAR5_0203
Byssochlamys spectabilis
PVAR5_0203
I
0.000
S40285_08790
Stachybotrys chlorohalonata
S40285_08790
I
0.000
S40288_04756
Stachybotrys chartarum
S40288_04756
I
0.000
SAPIO_CDS10068
Scedosporium apiospermum
SAPIO_CDS10068
I
0.000
SBOR_4818
Sclerotinia borealis
SBOR_4818
I
0.000
SEPMUDRAFT_77933
Sphaerulina musiva
SEPMUDRAFT_77933
I
0.000
SETTUDRAFT_125422
Setosphaeria turcica
SETTUDRAFT_125422
I
0.000
SMAC_02906
Sordaria macrospora
SMAC_02906
I
0.000
SNOG_07718
Stagonospora nodorum
SNOG_07718
I
0.000
SPBR_05957
Sporothrix brasiliensis
SPBR_05957
I
0.000
TEQG_06435
Trichophyton equinum
TEQG_06435
I
0.000
TESG_00820
Trichophyton tonsurans
TESG_00820
I
0.000
THITE_2112134
Thielavia terrestris
THITE_2112134
I
0.000
TRIATDRAFT_41152
Trichoderma atroviride
TRIATDRAFT_41152
I
0.000
TRIREDRAFT_4921
Trichoderma reesei
TRIREDRAFT_4921
I
0.000
TRIVIDRAFT_57749
Trichoderma virens
TRIVIDRAFT_57749
I
0.000
TRV_03506
Trichophyton verrucosum
TRV_03506
I
0.000
TSTA_048570
Talaromyces stipitatus
TSTA_048570
I
0.000
U727_0043123131
Penicillium solitum
U727_0043123131
I
0.000
UCRNP2_8268
Neofusicoccum parvum
UCRNP2_8268
I
0.000
UV8b_5144
Ustilaginoidea virens
UV8b_5144
I
0.000
VHEMI06571
Torrubiella hemipterigena
VHEMI06571
I
0.000
W97_05560
Coniosporium apollinis
W97_05560
I
0.000
X797_008515
Metarhizium robertsii
X797_008515
I
0.000