CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPLM_0001940801
(
Haemonchus placei
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
HPLM_0001940801
T190665_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
fd102C
M03750_2.00
Drosophila melanogaster
SCGAAGRACSKCAAGN
NCTTGMSGTYCTTCGS
SELEX
Nitta et al.(2015)
fd102C_1
0.777
0.762
fd102C
M03751_2.00
Drosophila melanogaster
CGAAGRACSK
MSGTYCTTCG
SELEX
Nitta et al.(2015)
fd102C_2
0.777
0.762
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0001940801-mRNA-1
Forkhead
32
119
KPQHSYIGLIAMAILSSPDKKMVLSEVYEWIMMHYPYFRTRGSGWRNSIRHNLSLNDCFVKAGRAANGKGHYWAVHPACLRDFERGDF
Links
Other
Forkhead
family TFs
Other
Haemonchus placei
TFs
138 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI5G20340
Brachypodium distachyon
BRADI5G20340
I
F775_25467
Aegilops tauschii
F775_25467
N
LPERR04G19570
Leersia perrieri
LPERR04G19570
I
MLOC_14305
Hordeum vulgare
MLOC_14305
I
OB04G30790
Oryza brachyantha
OB04G30790
I
Pavir.Ga00621
Panicum virgatum
Pavir.Ga00621
I
Pavir.Gb00795
Panicum virgatum
Pavir.Gb00795
I
Traes_2AL_83D0D0C3F
Triticum aestivum
Traes_2AL_83D0D0C3F
I
Traes_2BL_8DEC0EFBF
Triticum aestivum
Traes_2BL_8DEC0EFBF
I