CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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A1O3_04276
(
Capronia epimyces
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
A1O3_04276
T191554_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-2
M02016_2.00
Neurospora crassa
NNHGATNNN
NNNATCDNN
PBM
Weirauch et al.(2014)
pTH8611
0.856
0.972
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EXJ87317
GATA
423
458
CTDCGTLDSPEWRKGPNGPKTLCNACGLRWAKKEKK
Links
Other
GATA
family TFs
Other
Capronia epimyces
TFs
146 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA007535
Oryza indica
BGIOSGA007535
N
0.000
BRADI3G03747
Brachypodium distachyon
BRADI3G03747
N
0.000
GRMZM2G033138
Zea mays
GRMZM2G033138
N
0.000
GSMUA_Achr8G23890_001
Musa acuminata
GSMUA_Achr8G23890_001
N
0.000
LPERR02G03280
Leersia perrieri
LPERR02G03280
N
0.000
OB02G13160
Oryza brachyantha
OB02G13160
N
0.000
ORGLA02G0034400
Oryza glaberrima
ORGLA02G0034400
N
0.000
ORUFI02G03770
Oryza rufipogon
ORUFI02G03770
N
0.000
Pavir.Ab00383
Panicum virgatum
Pavir.Ab00383
N
0.000
Pavir.J02165
Panicum virgatum
Pavir.J02165
N
0.000
Sb04g003450
Sorghum bicolor
Sb04g003450
N
0.000
Si019956m.g
Setaria italica
Si019956m.g
N
0.000
Traes_6AS_9762AE81D
Triticum aestivum
Traes_6AS_9762AE81D
N
0.000