GATA16 (Arabidopsis thaliana)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 AT5G49300 T191731_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00		 Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.825 0.917
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.825 0.917
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G49300.1 GATA 38 73

Links

Other GATA family TFs
Other Arabidopsis thaliana TFs

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA037294 Oryza indica BGIOSGA037294 N
OBART12G09870 Oryza barthii OBART12G09870 N
OGLUM12G11100 Oryza glumaepatula OGLUM12G11100 N
ONIVA01G27180 Oryza nivara ONIVA01G27180 N
ORGLA12G0092700 Oryza glaberrima ORGLA12G0092700 N
ORUFI12G10940 Oryza rufipogon ORUFI12G10940 N