BGIOSGA007539 (Oryza indica)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 BGIOSGA007539 T191810_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS06G0698900
M02015_2.00 		Oryza sativa
NNNNAHBNN
NNVDTNNNN		 PBM
Weirauch et al.(2014)
pTH8641 		0.862 0.917
GATA24
M01941_2.00 		Arabidopsis thaliana
HGATBNN
NNVATCD		 PBM
Weirauch et al.(2014)
pTH7661 		0.862 0.889
GATA28
M01996_2.00 		Arabidopsis thaliana
NNGATNN
NNATCNN		 PBM
Weirauch et al.(2014)
pTH7505 		0.851 0.833
GATA28
M06883_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATG
CATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
ZML2_col_a 		0.851 0.833
ZIM
M06892_2.00 		Arabidopsis thaliana
AWYSRACGGYYVWGA
TCWBRRCCGTYSRWT		 Dap-seq
OMalley et al.(2016)
ZIM_col_a 		0.815 0.833
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA007539-PA GATA 198 235

Links

Other GATA family TFs
Other Oryza indica TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CEBPD Homo sapiens ENSG00000221869 D
CEBPD Otolemur garnettii ENSOGAG00000030449 I
CEBPD Monodelphis domestica ENSMODG00000010525 I
CEBPD Macaca mulatta ENSMMUG00000013151 I
CEBPD Pan troglodytes ENSPTRG00000042020 I
Cebpd Rattus norvegicus ENSRNOG00000050869 D
CEBPD Taeniopygia guttata ENSTGUG00000010839 I
CEBPD Gorilla gorilla ENSGGOG00000008077 I
cebpd Gasterosteus aculeatus ENSGACG00000017927 I
cebpd Tetraodon nigroviridis ENSTNIG00000000222 I
CEBPD Dasypus novemcinctus ENSDNOG00000025666 I
cebpd Danio rerio ENSDARG00000087303 I
CEBPD Callithrix jacchus ENSCJAG00000013678 I
cebpd Xenopus tropicalis XB-GENE-853588 I
Cebpd Mus musculus BAE29047.1 D
CEBPD Anolis carolinensis ENSACAG00000012009 I
cebpd.L Xenopus laevis XB-GENE-17330367 I
cebpd.S Xenopus laevis XB-GENE-866497 I
Cmyd_10014862 Chelonia mydas Cmyd_10014862 I
ENSAMXG00000025594 Astyanax mexicanus ENSAMXG00000025594 I
ENSAPLG00000002650 Anas platyrhynchos ENSAPLG00000002650 I
ENSCPOG00000025482 Cavia porcellus ENSCPOG00000025482 I
ENSFALG00000014184 Ficedula albicollis ENSFALG00000014184 I
ENSGMOG00000002585 Gadus morhua ENSGMOG00000002585 I
ENSLACG00000015084 Latimeria chalumnae ENSLACG00000015084 I
ENSLOCG00000017816 Lepisosteus oculatus ENSLOCG00000017816 I
ENSMPUG00000001146 Mustela putorius furo ENSMPUG00000001146 I
ENSOANG00000007261 Ornithorhynchus anatinus ENSOANG00000007261 I
ENSOARG00000011169 Ovis aries ENSOARG00000011169 I
ENSOCUG00000025135 Oryctolagus cuniculus ENSOCUG00000025135 I
ENSONIG00000021429 Oreochromis niloticus ENSONIG00000021429 I
ENSPFOG00000020361 Poecilia formosa ENSPFOG00000020361 I
ENSPPYG00000018572 Pongo abelii ENSPPYG00000018572 I
ENSSSCG00000006276 Sus scrofa ENSSSCG00000006276 I
ENSSTOG00000021236 Ictidomys tridecemlineatus ENSSTOG00000021236 I
ENSXMAG00000019437 Xiphophorus maculatus ENSXMAG00000019437 I
Pvit_15371 Pogona vitticeps Pvit_15371 I