Bra018665 (Brassica rapa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Bra018665 T191962_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.856 0.972
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.856 0.972
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.837 0.861
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.837 0.778
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.832 0.750
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.823 0.806
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.823 0.806
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.823 0.806
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.823 0.806
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.823 0.806
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.823 0.806
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.819 0.806
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.819 0.806
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.819 0.778
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.819 0.778
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.819 0.778
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.819 0.722
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.819 0.722
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra018665.1-P GATA 208 243

Links

Other GATA family TFs
Other Brassica rapa TFs

603 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL001428 Aedes aegypti AAEL001428 I
AALB005115 Anopheles albimanus AALB005115 I
AARA008036 Anopheles arabiensis AARA008036 I
AATE001925 Anopheles atroparvus AATE001925 I
ACHR004688 Anopheles christyi ACHR004688 I
ACOM025686 Anopheles coluzzii ACOM025686 I
ACUA018337 Anopheles culicifacies ACUA018337 I
ADAC002255 Anopheles darlingi ADAC002255 I
ADIR007247 Anopheles dirus ADIR007247 I
AFAF013289 Anopheles farauti AFAF013289 I
AFUN009268 Anopheles funestus AFUN009268 I
AGAP007450 Anopheles gambiae AGAP007450 I
AMEC000625 Anopheles melas AMEC000625 I
AMEM007511 Anopheles merus AMEM007511 I
AMIN010454 Anopheles minimus AMIN010454 I
AQUA004460 Anopheles quadriannulatus AQUA004460 I
ASIS014948 Anopheles sinensis ASIS014948 I
ASTEI01378 Anopheles stephensi ASTEI01378 I
CPIJ017595 Culex quinquefasciatus CPIJ017595 I
CpipJ_CPIJ017595 Culex pipiens CpipJ_CPIJ017595 I
DAPPUDRAFT_347250 Daphnia pulex DAPPUDRAFT_347250 N
ENSONIG00000002623 Oreochromis niloticus ENSONIG00000002623 I
ENSPFOG00000014160 Poecilia formosa ENSPFOG00000014160 I
ENSXMAG00000003593 Xiphophorus maculatus ENSXMAG00000003593 I
ENSXMAG00000014241 Xiphophorus maculatus ENSXMAG00000014241 I
GA10830 Drosophila pseudoobscura FBgn0070886 I
GD10199 Drosophila simulans FBgn0181974 I
GD10200 Drosophila simulans FBgn0181975 I
GE23399 Drosophila yakuba FBgn0240591 I
GF11221 Drosophila ananassae FBgn0088261 I
GG10686 Drosophila erecta FBgn0102992 I
GH19996 Drosophila grimshawi FBgn0127460 I
GI19174 Drosophila mojavensis FBgn0141913 I
GJ20236 Drosophila virilis FBgn0207376 I
GK21562 Drosophila willistoni FBgn0223554 I
GL10603 Drosophila persimilis FBgn0148213 I
GM20733 Drosophila sechellia FBgn0175614 I
Hey Drosophila melanogaster FBgn0027788 D
hey1 Oryzias latipes ENSORLG00000012953 I
HEYL Felis catus ENSFCAG00000010963 I
LCUP005888 Lucilia cuprina LCUP005888 I
LLOJ002069 Lutzomyia longipalpis LLOJ002069 I
LotgiG171867 Lottia gigantea LotgiG171867 I
MDOA011625 Musca domestica MDOA011625 I
Sjc_0014730 Schistosoma japonicum Sjc_0014730 N