Bra022107 (Brassica rapa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Bra022107 T191968_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA27
M02005_2.00 		Arabidopsis thaliana
NNGATBNNN
NNNVATCNN		 PBM
Weirauch et al.(2014)
pTH7492 		0.867 1.000
GATA26
M02001_2.00 		Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN		 PBM
Weirauch et al.(2014)
pTH7490 		0.867 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra022107.1-P GATA 7 42

Links

Other GATA family TFs
Other Brassica rapa TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
6354_YER130C Saccharomyces mikatae 6354_YER130C I 0.000
6484_YER130C Saccharomyces paradoxus 6484_YER130C I 0.000
6723_YER130C Saccharomyces bayanus 6723_YER130C I 0.000
AACERI_AaceriACL057W Saccharomycetaceae sp ashbya aceri AACERI_AaceriACL057W I 0.000
AGOS_ACL057W Ashbya gossypii AGOS_ACL057W I 0.000
CAGL0K02145g Candida glabrata CAGL0K02145g I 0.000
COM2 Saccharomyces cerevisiae YER130C D 0.000
DEHA2E03828g Debaryomyces hansenii DEHA2E03828g I 0.000
Ecym_8403 Eremothecium cymbalariae Ecym_8403 I 0.000
estExt_fgenesh1_pg.C_chr_7.10133 Pichia stipitis estExt_fgenesh1_pg.C_chr_7.10133 I 0.000
GNLVRS01_PISO0K16554g Millerozyma farinosa GNLVRS01_PISO0K16554g I 0.000
GNLVRS01_PISO0L16555g Millerozyma farinosa GNLVRS01_PISO0L16555g I 0.000
KAFR_0B02160 Kazachstania africana KAFR_0B02160 I 0.000
KLLA0_C17072g Kluyveromyces lactis KLLA0_C17072g D 0.000
KLTH0E06688g Lachancea thermotolerans KLTH0E06688g I 0.000
KLTH0E06688g Kluyveromyces thermotolerans KLTH0E06688g I 0.000
KNAG_0D02120 Kazachstania naganishii KNAG_0D02120 I 0.000
KNAG_0G01280 Kazachstania naganishii KNAG_0G01280 I 0.000
Kpol_1031p42 Vanderwaltozyma polyspora Kpol_1031p42 I 0.000
Kwal_17241 Kluyveromyces waltii Kwal_17241 I 0.000
LALA0_S01e12970g Lachancea lanzarotensis LALA0_S01e12970g I 0.000
NDAI_0B01930 Naumovozyma dairenensis NDAI_0B01930 I 0.000
PGUG_03478 Meyerozyma guilliermondii PGUG_03478 N 0.000
PGUG_03478 Candida guilliermondii PGUG_03478 N 0.000
PICST_68294 Scheffersomyces stipitis PICST_68294 I 0.000
SAKL0H24816g Lachancea kluyveri SAKL0H24816g I 0.000
SU7_0930 Saccharomyces arboricola SU7_0930 I 0.000
TDEL_0B04670 Torulaspora delbrueckii TDEL_0B04670 I 0.000
TPHA_0D01050 Tetrapisispora phaffii TPHA_0D01050 I 0.000
ZBAI_08232 Zygosaccharomyces bailii ZBAI_08232 I 0.000