CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGGC5_6860
(
Colletotrichum gloeosporioides
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
CGGC5_6860
T192230_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.867
1.000
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ELA33237
GATA
231
266
CHSCNRIDTPEWRRGPDGARTLCNACGLHYAKLERK
Links
Other
GATA
family TFs
Other
Colletotrichum gloeosporioides
TFs
207 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GA14213
Drosophila pseudoobscura
FBgn0074242
N
GF11542
Drosophila ananassae
FBgn0088582
N
GG19889
Drosophila erecta
FBgn0112090
N
GK21648
Drosophila willistoni
FBgn0223640
N
GL17696
Drosophila persimilis
FBgn0155299
N
GM11789
Drosophila sechellia
FBgn0166732
N
key
Drosophila melanogaster
FBgn0041205
N
key
Drosophila yakuba
FBgn0067428
N
key
Drosophila simulans
FBgn0067496
N
MDOA003395
Musca domestica
MDOA003395
N