CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CHLREDRAFT_187360
(
Chlamydomonas reinhardtii
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
CHLREDRAFT_187360
T192259_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
0300010106
M02018_2.00
Ostreococcus tauri
NNNKATCN
NGATMNNN
PBM
Weirauch et al.(2014)
pTH7890
0.851
0.917
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDP07160
GATA
1048
1083
CDHCGATESPQWRRGPPAKPMLCNACGTRYRRTNQL
Links
Other
GATA
family TFs
Other
Chlamydomonas reinhardtii
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action