COCMIDRAFT_87275 (Bipolaris oryzae)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 COCMIDRAFT_87275 T192335_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
wc-1
M01236_2.00 		Neurospora crassa
MCGATCGM
KCGATCGK		 PBM
Lambert et al.(2019)
pTH9706 		0.865 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EUC48480 GATA 934 969

Links

Other GATA family TFs
Other Bipolaris oryzae TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28179.m000458 Ricinus communis 28179.m000458 N
cassava20168.m1 Manihot esculenta cassava20168.m1 N
cassava44568.m1 Manihot esculenta cassava44568.m1 N
Ciclev10026033m.g Citrus clementina Ciclev10026033m.g N
Cla014299 Citrullus lanatus Cla014299 N
evm.TU.supercontig_129.20 Carica papaya evm.TU.supercontig_129.20 N
gene05559-v1.0-hybrid Fragaria vesca gene05559-v1.0-hybrid N
GLYMA01G02380 Glycine max GLYMA01G02380 N
GLYMA09G33600 Glycine max GLYMA09G33600 N
Gorai.003G035800 Gossypium raimondii Gorai.003G035800 N
Gorai.007G058000 Gossypium raimondii Gorai.007G058000 N
Lus10002159.g Linum usitatissimum Lus10002159.g N
Lus10039632.g Linum usitatissimum Lus10039632.g N
MDP0000312273 Malus domestica MDP0000312273 N
MTR_7g076850 Medicago truncatula MTR_7g076850 N
orange1.1g037355m.g Citrus sinensis orange1.1g037355m.g N
PK06741.1 Cannabis sativa PK06741.1 N
Pm002284 Prunus mume Pm002284 N
POPTR_0006s29510 Populus trichocarpa POPTR_0006s29510 N
POPTR_0018s04230 Populus trichocarpa POPTR_0018s04230 N
PRUPE_ppa003947mg Prunus persica PRUPE_ppa003947mg N
SapurV1A.0263s0050 Salix purpurea SapurV1A.0263s0050 N
TCM_000914 Theobroma cacao TCM_000914 N
VIT_17s0000g03540 Vitis vinifera VIT_17s0000g03540 N