GRMZM2G054615 (Zea mays)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 GRMZM2G054615 T193551_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.856 0.944
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.856 0.944
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.847 0.833
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.847 0.833
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.847 0.833
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.847 0.806
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.837 0.806
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.832 0.778
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.832 0.778
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.832 0.778
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.832 0.778
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.832 0.778
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.832 0.778
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.828 0.917
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.819 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.722
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.819 0.722
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.819 0.722
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G054615_P01 GATA 358 393
GRMZM2G054615_P02 GATA 249 284

Links

Other GATA family TFs
Other Zea mays TFs

610 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R002985 Calypte anna Aan_R002985 N
Afo_R005157 Aptenodytes forsteri Afo_R005157 I
Brh_R005579 Buceros rhinoceros Brh_R005579 I
Cmyd_10016917 Chelonia mydas Cmyd_10016917 N
ENSCSAG00000013410 Chlorocebus sabaeus ENSCSAG00000013410 I
ENSFALG00000008605 Ficedula albicollis ENSFALG00000008605 I
ENSGALG00000027364 Gallus gallus ENSGALG00000027364 N
ENSGMOG00000013488 Gadus morhua ENSGMOG00000013488 I
ENSLACG00000015540 Latimeria chalumnae ENSLACG00000015540 I
ENSMEUG00000008397 Macropus eugenii ENSMEUG00000008397 N
ENSMPUG00000001859 Mustela putorius furo ENSMPUG00000001859 I
ENSNLEG00000002239 Nomascus leucogenys ENSNLEG00000002239 I
ENSNLEG00000011965 Nomascus leucogenys ENSNLEG00000011965 N
ENSOARG00000008063 Ovis aries ENSOARG00000008063 I
ENSONIG00000003087 Oreochromis niloticus ENSONIG00000003087 I
ENSOPRG00000001708 Ochotona princeps ENSOPRG00000001708 I
ENSPANG00000018687 Papio anubis ENSPANG00000018687 I
ENSPFOG00000001913 Poecilia formosa ENSPFOG00000001913 I
ENSPPYG00000018693 Pongo abelii ENSPPYG00000018693 I
ENSPSIG00000003791 Pelodiscus sinensis ENSPSIG00000003791 I
ENSSHAG00000017958 Sarcophilus harrisii ENSSHAG00000017958 I
ENSSTOG00000010427 Ictidomys tridecemlineatus ENSSTOG00000010427 N
ENSSTOG00000023191 Ictidomys tridecemlineatus ENSSTOG00000023191 I
Gfo_R007552 Geospiza fortis Gfo_R007552 I
HEY1 Sus scrofa ENSSSCG00000006159 I
Hey1 Rattus norvegicus ENSRNOG00000011593 I
HEY1 Tetraodon nigroviridis ENSTNIG00000018401 I
HEY1 Takifugu rubripes ENSTRUG00000013573 I
hey1 Xenopus tropicalis XB-GENE-486694 I
HEY1 Canis familiaris ENSCAFG00000008391 I
HEY1 Otolemur garnettii ENSOGAG00000007210 I
HEY1 Bos taurus ENSBTAG00000015717 I
HEY1 Cavia porcellus ENSCPOG00000008527 I
hey1 Danio rerio ENSDARG00000070538 I
HEY1 Dasypus novemcinctus ENSDNOG00000031981 I
HEY1 Equus caballus ENSECAG00000017010 I
HEY1 Felis catus ENSFCAG00000025542 I
HEY1 Homo sapiens ENSG00000164683 D
hey1 Gasterosteus aculeatus ENSGACG00000003436 I
HEY1 Gorilla gorilla ENSGGOG00000009960 I
HEY1 Loxodonta africana ENSLAFG00000011488 I
HEY1 Myotis lucifugus ENSMLUG00000009035 N
HEY1 Monodelphis domestica ENSMODG00000006648 I
Hey1 Mus musculus ENSMUSG00000040289 I
HEY1 Oryzias latipes ENSORLG00000008268 I
hey1.S Xenopus laevis XB-GENE-865637 I
HEYL Callithrix jacchus ENSCJAG00000002556 N
Myotis_brandtii_HEY1_10021379 Myotis brandtii Myotis_brandtii_HEY1_10021379 I
Ogr14041 Ophisaurus gracilis Ogr14041 I
Pvit_00065 Pogona vitticeps Pvit_00065 I