CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NechaG37508
(
Fusarium solani
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
NechaG37508
T194286_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-1
M01236_2.00
Neurospora crassa
MCGATCGM
KCGATCGK
PBM
Lambert et al.(2019)
pTH9706
0.867
0.972
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NechaP37508
GATA
880
915
CANCHTRNTPEWRRGPSGQRDLCNSCGLRWAKQTGR
Links
Other
GATA
family TFs
Other
Fusarium solani
TFs
126 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28179.m000458
Ricinus communis
28179.m000458
N
cassava44568.m1
Manihot esculenta
cassava44568.m1
N
Ciclev10026033m.g
Citrus clementina
Ciclev10026033m.g
N
Cla014299
Citrullus lanatus
Cla014299
N
Cucsa.103750
Cucumis sativus
Cucsa.103750
N
evm.TU.supercontig_129.20
Carica papaya
evm.TU.supercontig_129.20
N
Lus10039632.g
Linum usitatissimum
Lus10039632.g
N
MDP0000312273
Malus domestica
MDP0000312273
N
MTR_7g076850
Medicago truncatula
MTR_7g076850
N
orange1.1g037355m.g
Citrus sinensis
orange1.1g037355m.g
N
POPTR_0006s29510
Populus trichocarpa
POPTR_0006s29510
N
POPTR_0018s04230
Populus trichocarpa
POPTR_0018s04230
N
SapurV1A.0493s0270
Salix purpurea
SapurV1A.0493s0270
N
VIT_17s0000g03540
Vitis vinifera
VIT_17s0000g03540
N