CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PAXINDRAFT_134989
(
Paxillus involutus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
PAXINDRAFT_134989
T194629_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.856
0.889
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIJ14405
GATA
681
716
CHSCNIRETPEWRRGPDGARTLCNACGLHYAKLVRK
Links
Other
GATA
family TFs
Other
Paxillus involutus
TFs
203 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1Q1_02722
Trichosporon asahii
A1Q1_02722
N
CNM00790
Cryptococcus neoformans
CNM00790
N
PV09_03870
Verruconis gallopava
PV09_03870
N