POPTR_0010s23010 (Populus trichocarpa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 POPTR_0010s23010 T194897_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.867 0.972
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.848 0.944
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.847 0.833
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.847 0.833
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.847 0.833
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.847 0.806
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.847 0.806
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.843 0.833
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.843 0.833
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.843 0.833
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.843 0.833
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.832 0.806
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.832 0.806
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.823 0.806
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.823 0.806
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.778
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.819 0.750
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0010s23010.1 GATA 256 291
POPTR_0010s23010.2 GATA 256 291

Links

Other GATA family TFs
Other Populus trichocarpa TFs

614 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R001177 Calypte anna Aan_R001177 I
Aan_R007355 Calypte anna Aan_R007355 I
Afo_R004850 Aptenodytes forsteri Afo_R004850 I
Afo_R005014 Aptenodytes forsteri Afo_R005014 I
Alligator_sinensis_CCG011357.1 Alligator sinensis Alligator_sinensis_CCG011357.1 I
Alligator_sinensis_CCG011722.1 Alligator sinensis Alligator_sinensis_CCG011722.1 I
BACH1 Anolis carolinensis ENSACAG00000001974 I
BACH1 Bos taurus ENSBTAG00000004139 I
BACH1 Canis familiaris ENSCAFG00000008729 I
BACH1 Choloepus hoffmanni ENSCHOG00000008331 I
BACH1 Callithrix jacchus ENSCJAG00000008651 I
BACH1 Cavia porcellus ENSCPOG00000008737 I
BACH1 Dasypus novemcinctus ENSDNOG00000034053 I
BACH1 Equus caballus ENSECAG00000000307 I
BACH1 Erinaceus europaeus ENSEEUG00000011474 I
BACH1 Echinops telfairi ENSETEG00000017222 I
BACH1 Felis catus ENSFCAG00000010547 I
BACH1 Homo sapiens ENSG00000156273 D
BACH1 Gallus gallus ENSGALG00000015828 I
BACH1 Gorilla gorilla ENSGGOG00000006094 I
BACH1 Loxodonta africana ENSLAFG00000029492 I
BACH1 Meleagris gallopavo ENSMGAG00000014508 I
BACH1 Macaca mulatta ENSMMUG00000011095 I
BACH1 Monodelphis domestica ENSMODG00000020976 I
Bach1 Mus musculus ENSMUSG00000025612 D
BACH1 Ornithorhynchus anatinus ENSOANG00000005242 I
BACH1 Oryctolagus cuniculus ENSOCUG00000016716 I
BACH1 Otolemur garnettii ENSOGAG00000012819 I
BACH1 Ochotona princeps ENSOPRG00000003937 I
BACH1 Pan troglodytes ENSPTRG00000013824 I
BACH1 Pteropus vampyrus ENSPVAG00000003585 I
Bach1 Rattus norvegicus ENSRNOG00000001582 I
BACH1 Sorex araneus ENSSARG00000010869 I
BACH1 Sus scrofa ENSSSCG00000012029 I
BACH1 Tupaia belangeri ENSTBEG00000010199 I
BACH1 Taeniopygia guttata ENSTGUG00000013585 I
BACH1 Vicugna pacos ENSVPAG00000012419 I
bach1 Xenopus tropicalis XB-GENE-957116 I
bach1a Danio rerio ENSDARG00000062553 I
bach1a Gasterosteus aculeatus ENSGACG00000011798 I
bach1a Oryzias latipes ENSORLG00000003339 I
bach1a Tetraodon nigroviridis ENSTNIG00000019024 I
bach1a Takifugu rubripes ENSTRUG00000014936 I
bach1b Danio rerio ENSDARG00000002196 I
BACH2 Anolis carolinensis ENSACAG00000014366 I
BACH2 Bos taurus ENSBTAG00000020713 I
BACH2 Canis familiaris ENSCAFG00000003116 I
BACH2 Callithrix jacchus ENSCJAG00000001013 I
BACH2 Dasypus novemcinctus ENSDNOG00000042939 I
BACH2 Equus caballus ENSECAG00000010522 I
BACH2 Erinaceus europaeus ENSEEUG00000001063 I
BACH2 Felis catus ENSFCAG00000008901 I
BACH2 Homo sapiens ENSG00000112182 D
BACH2 Gallus gallus ENSGALG00000015605 I
BACH2 Gorilla gorilla ENSGGOG00000012497 I
BACH2 Meleagris gallopavo ENSMGAG00000013626 I
BACH2 Myotis lucifugus ENSMLUG00000001651 I
BACH2 Macaca mulatta ENSMMUG00000009736 I
BACH2 Monodelphis domestica ENSMODG00000018176 I
Bach2 Mus musculus ENSMUSG00000040270 D
BACH2 Oryctolagus cuniculus ENSOCUG00000004231 I
BACH2 Otolemur garnettii ENSOGAG00000024390 I
BACH2 Ochotona princeps ENSOPRG00000008266 I
BACH2 Procavia capensis ENSPCAG00000001355 I
BACH2 Pan troglodytes ENSPTRG00000018426 I
BACH2 Pteropus vampyrus ENSPVAG00000016152 I
Bach2 Rattus norvegicus ENSRNOG00000006170 I
BACH2 Sus scrofa ENSSSCG00000004332 I
BACH2 Tupaia belangeri ENSTBEG00000008433 I
BACH2 Taeniopygia guttata ENSTGUG00000012380 I
BACH2 Tursiops truncatus ENSTTRG00000003941 I
bach2 Xenopus tropicalis XB-GENE-994313 I
bach2a Danio rerio ENSDARG00000036569 I
bach2a Gasterosteus aculeatus ENSGACG00000002017 I
bach2a Oryzias latipes ENSORLG00000011098 I
bach2b Danio rerio ENSDARG00000004074 I
bach2b Gasterosteus aculeatus ENSGACG00000006245 I
bach2b Oryzias latipes ENSORLG00000017926 I
bach2b Tetraodon nigroviridis ENSTNIG00000003864 I
Brh_R002617 Buceros rhinoceros Brh_R002617 I
Brh_R008770 Buceros rhinoceros Brh_R008770 I
Cmyd_10011594 Chelonia mydas Cmyd_10011594 I
Cmyd_10020811 Chelonia mydas Cmyd_10020811 I
ENSAMEG00000003595 Ailuropoda melanoleuca ENSAMEG00000003595 I
ENSAMEG00000008438 Ailuropoda melanoleuca ENSAMEG00000008438 I
ENSAMXG00000008686 Astyanax mexicanus ENSAMXG00000008686 I
ENSAMXG00000014356 Astyanax mexicanus ENSAMXG00000014356 I
ENSAMXG00000015064 Astyanax mexicanus ENSAMXG00000015064 I
ENSAMXG00000020851 Astyanax mexicanus ENSAMXG00000020851 I
ENSAPLG00000002486 Anas platyrhynchos ENSAPLG00000002486 I
ENSAPLG00000004662 Anas platyrhynchos ENSAPLG00000004662 I
ENSBTAP00000005416-D1 Bos grunniens ENSBTAP00000005416-D1 I
ENSBTAP00000027603-D1 Bos grunniens ENSBTAP00000027603-D1 I
ENSCPOG00000009261 Cavia porcellus ENSCPOG00000009261 I
ENSCSAG00000009211 Chlorocebus sabaeus ENSCSAG00000009211 I
ENSCSAG00000017273 Chlorocebus sabaeus ENSCSAG00000017273 I
ENSDORG00000003106 Dipodomys ordii ENSDORG00000003106 I
ENSFALG00000003160 Ficedula albicollis ENSFALG00000003160 I
ENSFALG00000006318 Ficedula albicollis ENSFALG00000006318 I
ENSGMOG00000002053 Gadus morhua ENSGMOG00000002053 I
ENSGMOG00000002062 Gadus morhua ENSGMOG00000002062 I
ENSGMOG00000009808 Gadus morhua ENSGMOG00000009808 I
ENSGMOG00000015765 Gadus morhua ENSGMOG00000015765 I
ENSLACG00000001994 Latimeria chalumnae ENSLACG00000001994 I
ENSLACG00000003435 Latimeria chalumnae ENSLACG00000003435 I
ENSLOCG00000009077 Lepisosteus oculatus ENSLOCG00000009077 I
ENSLOCG00000016952 Lepisosteus oculatus ENSLOCG00000016952 I
ENSMEUG00000000125 Macropus eugenii ENSMEUG00000000125 I
ENSMEUG00000016322 Macropus eugenii ENSMEUG00000016322 I
ENSMICG00000005097 Microcebus murinus ENSMICG00000005097 I
ENSMPUG00000001053 Mustela putorius furo ENSMPUG00000001053 I
ENSMPUG00000009102 Mustela putorius furo ENSMPUG00000009102 I
ENSNLEG00000003356 Nomascus leucogenys ENSNLEG00000003356 I
ENSNLEG00000013316 Nomascus leucogenys ENSNLEG00000013316 I
ENSOARG00000012361 Ovis aries ENSOARG00000012361 I
ENSOARG00000014393 Ovis aries ENSOARG00000014393 I
ENSONIG00000001606 Oreochromis niloticus ENSONIG00000001606 I
ENSONIG00000004708 Oreochromis niloticus ENSONIG00000004708 I
ENSONIG00000005635 Oreochromis niloticus ENSONIG00000005635 I
ENSORLG00000004475 Oryzias latipes ENSORLG00000004475 I
ENSP00000286800 Macaca fascicularis ENSP00000286800 I
ENSP00000345642 Macaca fascicularis ENSP00000345642 I
ENSPANG00000006817 Papio anubis ENSPANG00000006817 I
ENSPANG00000007661 Papio anubis ENSPANG00000007661 I
ENSPFOG00000002681 Poecilia formosa ENSPFOG00000002681 I
ENSPFOG00000009427 Poecilia formosa ENSPFOG00000009427 I
ENSPFOG00000013310 Poecilia formosa ENSPFOG00000013310 I
ENSPFOG00000017325 Poecilia formosa ENSPFOG00000017325 I
ENSPMAG00000005517 Petromyzon marinus ENSPMAG00000005517 I
ENSPPYG00000011322 Pongo abelii ENSPPYG00000011322 I
ENSPPYG00000016849 Pongo abelii ENSPPYG00000016849 I
ENSPSIG00000009237 Pelodiscus sinensis ENSPSIG00000009237 I
ENSPSIG00000016485 Pelodiscus sinensis ENSPSIG00000016485 I
ENSSHAG00000006419 Sarcophilus harrisii ENSSHAG00000006419 I
ENSSHAG00000016295 Sarcophilus harrisii ENSSHAG00000016295 I
ENSSTOG00000003942 Ictidomys tridecemlineatus ENSSTOG00000003942 I
ENSSTOG00000005129 Ictidomys tridecemlineatus ENSSTOG00000005129 I
ENSTNIG00000001421 Tetraodon nigroviridis ENSTNIG00000001421 I
ENSTRUG00000009007 Takifugu rubripes ENSTRUG00000009007 I
ENSTSYG00000009578 Tarsius syrichta ENSTSYG00000009578 I
ENSTSYG00000010694 Tarsius syrichta ENSTSYG00000010694 I
ENSXMAG00000007309 Xiphophorus maculatus ENSXMAG00000007309 I
ENSXMAG00000013761 Xiphophorus maculatus ENSXMAG00000013761 I
ENSXMAG00000014429 Xiphophorus maculatus ENSXMAG00000014429 I
ENSXMAG00000017662 Xiphophorus maculatus ENSXMAG00000017662 I
Gfo_R007851 Geospiza fortis Gfo_R007851 I
Gfo_R008348 Geospiza fortis Gfo_R008348 I
Myotis_brandtii_BACH1_10005484 Myotis brandtii Myotis_brandtii_BACH1_10005484 I
Myotis_brandtii_Bach2_10023882 Myotis brandtii Myotis_brandtii_Bach2_10023882 I
Ogr00706 Ophisaurus gracilis Ogr00706 I
Ogr07752 Ophisaurus gracilis Ogr07752 I
Pvit_09321 Pogona vitticeps Pvit_09321 I
Pvit_10701 Pogona vitticeps Pvit_10701 I
Tal_R000432 Tyto alba Tal_R000432 I