CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SBOR_2773
(
Sclerotinia borealis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
SBOR_2773
T195120_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.861
0.917
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESZ96852
GATA
404
439
CHSCNRAETPEWRRGPDGARTLCNACGLHYAKLTRK
Links
Other
GATA
family TFs
Other
Sclerotinia borealis
TFs
204 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_13650
Colletotrichum fioriniae
CFIO01_13650
N
CGGC5_13404
Colletotrichum gloeosporioides
CGGC5_13404
N
Cob_03629
Colletotrichum orbiculare
Cob_03629
N
FOXG_14975
Fusarium oxysporum
FOXG_14975
I
0.830
GLRG_06501
Colletotrichum graminicola
GLRG_06501
N