CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SERLA73DRAFT_160841
(
Serpula lacrymans
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
SERLA73DRAFT_160841
T195180_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.856
0.889
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGN99506
GATA
150
185
CHSCNIRETPEWRRGPDGARTLCNACGLHYAKLVRK
Links
Other
GATA
family TFs
Other
Serpula lacrymans
TFs
203 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA05G07522
Glycine max
GLYMA05G07522
N
Gorai.008G200600
Gossypium raimondii
Gorai.008G200600
N
TCM_014407
Theobroma cacao
TCM_014407
N