CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SETTUDRAFT_85575
(
Setosphaeria turcica
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
SETTUDRAFT_85575
T195195_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-2
M02016_2.00
Neurospora crassa
NNHGATNNN
NNNATCDNN
PBM
Weirauch et al.(2014)
pTH8611
0.856
0.972
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOA91393
GATA
390
425
CTDCGTLDSPEWRKGPNGPKTLCNACGLRWAKKEKK
Links
Other
GATA
family TFs
Other
Setosphaeria turcica
TFs
146 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10000498
Chelonia mydas
Cmyd_10000498
I
0.000
ENSEEUG00000003070
Erinaceus europaeus
ENSEEUG00000003070
I
0.000
ENSLACG00000011281
Latimeria chalumnae
ENSLACG00000011281
I
0.000
ENSNLEG00000013783
Nomascus leucogenys
ENSNLEG00000013783
I
0.000
ENSONIG00000000809
Oreochromis niloticus
ENSONIG00000000809
I
0.000
ENSSSCG00000012796
Sus scrofa
ENSSSCG00000012796
I
0.000
MECP2
Anolis carolinensis
ENSACAG00000012519
I
0.000
MECP2
Echinops telfairi
ENSETEG00000009825
I
0.000
MECP2
Homo sapiens
ENSG00000169057
D
0.000
mecp2
Oryzias latipes
ENSORLG00000020117
I
0.000
MECP2
Procavia capensis
ENSPCAG00000011826
I
0.000
mecp2
Tetraodon nigroviridis
ENSTNIG00000005114
I
0.000
mecp2
Takifugu rubripes
ENSTRUG00000006419
I
0.000