VIT_05s0077g01450 (Vitis vinifera)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 VIT_05s0077g01450 T195671_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.838 0.889
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.818 0.889
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.818 0.889
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_05s0077g01450.t01 GATA 36 71

Links

Other GATA family TFs
Other Vitis vinifera TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G32950 Brachypodium distachyon BRADI1G32950 N 0.000
BRADI2G27040 Brachypodium distachyon BRADI2G27040 N 0.000
F775_11444 Aegilops tauschii F775_11444 N 0.000
MLOC_43923 Hordeum vulgare MLOC_43923 N 0.000
MLOC_60965 Hordeum vulgare MLOC_60965 N 0.000
Traes_1BL_A75EDBFD9 Triticum aestivum Traes_1BL_A75EDBFD9 N 0.000
Traes_2BS_3CA0FC03E Triticum aestivum Traes_2BS_3CA0FC03E N 0.000
Traes_2DL_01DEC201E Triticum aestivum Traes_2DL_01DEC201E N 0.000
Traes_3AL_29AD9D378 Triticum aestivum Traes_3AL_29AD9D378 N 0.000
Traes_5BL_B569B5FF4 Triticum aestivum Traes_5BL_B569B5FF4 N 0.000
Traes_6DL_9097A97D9 Triticum aestivum Traes_6DL_9097A97D9 N 0.000
Traes_7AS_DE61FE07F Triticum aestivum Traes_7AS_DE61FE07F N 0.000
Traes_7DS_EB10DBA07 Triticum aestivum Traes_7DS_EB10DBA07 N 0.000
TRIUR3_06404 Triticum urartu TRIUR3_06404 N 0.000
TRIUR3_17083 Triticum urartu TRIUR3_17083 N 0.000