SRD1 (Saccharomyces cerevisiae)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 YCR018C T195736_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SRD1
M00047_2.00		 Saccharomyces cerevisiae
RGATCTMC
GKAGATCY		 PBM
Badis et al.(2008)
SRD1_2031		 (Direct) (Direct)
SRD1
M01544_2.00		 Saccharomyces cerevisiae
NBAGWTYNN
NNRAWCTVN		 PBM
Zhu et al.(2009)
Srd1		 (Direct) (Direct)
SRD1
M07476_2.00		 Saccharomyces cerevisiae
RGATCTVN
NBAGATCY		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0389.1		 (Direct) (Direct)
SRD1
M08558_2.00		 Saccharomyces cerevisiae
RGATCTMN
NKAGATCY		 Misc
DeBoer et al.(2011)
YCR018C_530		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.802 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00047_2.00 GATA 51 86
M01544_2.00 GATA 168 203

DNA Binding Domains

Protein ID Domain From To Sequence
YCR018C GATA 168 203

Links

Other GATA family TFs
Other Saccharomyces cerevisiae TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1998_YCR018C Saccharomyces mikatae 1998_YCR018C I 0.856
2489_YCR018C Saccharomyces paradoxus 2489_YCR018C I 0.836
24940_YPL021W Saccharomyces bayanus 24940_YPL021W I 0.808
2668_Multiple Saccharomyces bayanus 2668_Multiple I 0.855
SKUD_204801 Saccharomyces kudriavzevii SKUD_204801 I 0.867
SU7_0367 Saccharomyces arboricola SU7_0367 I 0.856