CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_05292
(
Cicer arietinum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Ca_05292
T195844_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_05292
GATA
177
214
CQHCGIGEKSTPAMRRGPAGPRSLCNACGLMWANKGTL
Links
Other
GATA
family TFs
Other
Cicer arietinum
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI1G09550
Brachypodium distachyon
BRADI1G09550
N
0.831
chr4.CM0100.130.nc
Lotus japonicus
chr4.CM0100.130.nc
N
0.857
evm.TU.supercontig_20.16
Carica papaya
evm.TU.supercontig_20.16
N
0.857
GATA19
Oryza indica
BGIOSGA009856
N
0.831
GATA19
Oryza sativa
OS03G0734900
N
0.831
gene27406-v1.0-hybrid
Fragaria vesca
gene27406-v1.0-hybrid
N
0.837
GLYMA07G30140
Glycine max
GLYMA07G30140
N
0.862
GLYMA08G07170
Glycine max
GLYMA08G07170
N
0.862
GRMZM2G065896
Zea mays
GRMZM2G065896
N
0.831
GSMUA_Achr6G04510_001
Musa acuminata
GSMUA_Achr6G04510_001
N
0.831
GSMUA_Achr7G01650_001
Musa acuminata
GSMUA_Achr7G01650_001
N
0.831
OB03G40300
Oryza brachyantha
OB03G40300
N
0.831
OBART03G33220
Oryza barthii
OBART03G33220
N
0.831
OGLUM03G32890
Oryza glumaepatula
OGLUM03G32890
N
0.831
OLONG_026796
Oryza longistaminata
OLONG_026796
N
0.831
OMERI03G29830
Oryza meridionalis
OMERI03G29830
N
0.831
ONIVA03G34920
Oryza nivara
ONIVA03G34920
N
0.831
OPUNC03G30420
Oryza punctata
OPUNC03G30420
N
0.831
ORGLA03G0301600
Oryza glaberrima
ORGLA03G0301600
N
0.831
ORUFI03G34610
Oryza rufipogon
ORUFI03G34610
N
0.831
Pavir.Ia00665
Panicum virgatum
Pavir.Ia00665
N
0.831
Pavir.J00664
Panicum virgatum
Pavir.J00664
N
0.831
PK04189.1
Cannabis sativa
PK04189.1
N
0.851
Pm022161
Prunus mume
Pm022161
N
0.862
PRUPE_ppa023830mg
Prunus persica
PRUPE_ppa023830mg
N
0.862
Sb01g008950
Sorghum bicolor
Sb01g008950
N
0.830
Si036747m.g
Setaria italica
Si036747m.g
N
0.831