29634.m002146 (Ricinus communis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 29634.m002146 T195991_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.867 1.000
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.867 1.000
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.825 0.944
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.825 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29634.m002146 GATA 217 252

Links

Other GATA family TFs
Other Ricinus communis TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003309 Calypte anna Aan_R003309 N 0.000
Afo_R009777 Aptenodytes forsteri Afo_R009777 N 0.000
Alligator_sinensis_CCG018823.1 Alligator sinensis Alligator_sinensis_CCG018823.1 N 0.000
Cmyd_10015207 Chelonia mydas Cmyd_10015207 N 0.000
ENSAMEG00000009571 Ailuropoda melanoleuca ENSAMEG00000009571 N 0.000
ENSAPLG00000006697 Anas platyrhynchos ENSAPLG00000006697 N 0.000
ENSCSAG00000013961 Chlorocebus sabaeus ENSCSAG00000013961 N 0.000
ENSFALG00000005566 Ficedula albicollis ENSFALG00000005566 N 0.000
ENSGALG00000027603 Gallus gallus ENSGALG00000027603 N 0.000
ENSLACG00000019016 Latimeria chalumnae ENSLACG00000019016 N 0.000
ENSLOCG00000004596 Lepisosteus oculatus ENSLOCG00000004596 N 0.000
ENSMMUP00000037938 Macaca fascicularis ENSMMUP00000037938 N 0.000
ENSMPUG00000017699 Mustela putorius furo ENSMPUG00000017699 N 0.000
ENSNLEG00000006488 Nomascus leucogenys ENSNLEG00000006488 N 0.000
ENSP00000380144-D1 Bos grunniens ENSP00000380144-D1 N 0.000
ENSPPYG00000011012 Pongo abelii ENSPPYG00000011012 N 0.000
ENSPSIG00000010741 Pelodiscus sinensis ENSPSIG00000010741 N 0.000
ENSSTOG00000011674 Ictidomys tridecemlineatus ENSSTOG00000011674 N 0.000
Myotis_brandtii_ZHX3_10025211 Myotis brandtii Myotis_brandtii_ZHX3_10025211 N 0.000
Ogr10588 Ophisaurus gracilis Ogr10588 N 0.000
Pvit_08734 Pogona vitticeps Pvit_08734 N 0.000
ZHX3 Sorex araneus ENSSARG00000005424 N 0.000
ZHX3 Felis catus ENSFCAG00000009034 N 0.000
ZHX3 Homo sapiens ENSG00000174306 N 0.000
ZHX3 Echinops telfairi ENSETEG00000005517 N 0.000
ZHX3 Gorilla gorilla ENSGGOG00000008691 N 0.000
ZHX3 Bos taurus ENSBTAG00000017594 N 0.000
ZHX3 Canis familiaris ENSCAFG00000009101 N 0.000
ZHX3 Choloepus hoffmanni ENSCHOG00000009000 N 0.000
ZHX3 Callithrix jacchus ENSCJAG00000018012 N 0.000
ZHX3 Cavia porcellus ENSCPOG00000002738 N 0.000
ZHX3 Tursiops truncatus ENSTTRG00000002687 N 0.000
ZHX3 Taeniopygia guttata ENSTGUG00000004817 N 0.000
Zhx3 Dipodomys ordii ENSDORG00000012139 N 0.000
ZHX3 Macaca mulatta ENSMMUG00000005904 N 0.000
Zhx3 Rattus norvegicus ENSRNOG00000027988 N 0.000
ZHX3 Pan troglodytes ENSPTRG00000013501 N 0.000
ZHX3 Loxodonta africana ENSLAFG00000022196 N 0.000
ZHX3 Dasypus novemcinctus ENSDNOG00000005387 N 0.000
ZHX3 Ochotona princeps ENSOPRG00000014931 N 0.000
ZHX3 Otolemur garnettii ENSOGAG00000013363 N 0.000
ZHX3 Oryctolagus cuniculus ENSOCUG00000006439 N 0.000
ZHX3 Ornithorhynchus anatinus ENSOANG00000014351 N 0.000
ZHX3 Myotis lucifugus ENSMLUG00000010226 N 0.000
Zhx3 Mus musculus ENSMUSG00000035877 N 0.000
ZHX3 Anolis carolinensis ENSACAG00000011460 N 0.000
ZHX3 Monodelphis domestica ENSMODG00000000636 N 0.000