cassava1071.valid.m1 (Manihot esculenta)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 cassava1071.valid.m1 T196004_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.867 1.000
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.867 1.000
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.867 1.000
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.862 0.972
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.847 0.889
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.847 0.889
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.843 0.833
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.843 0.833
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.838 0.806
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.832 0.833
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.832 0.833
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.832 0.833
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.832 0.778
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.832 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.823 0.806
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.823 0.806
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.823 0.806
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava1071.valid.m1 GATA 260 295

Links

Other GATA family TFs
Other Manihot esculenta TFs

614 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011420 Calypte anna Aan_R011420 I
Afo_R008621 Aptenodytes forsteri Afo_R008621 I
Alligator_sinensis_CCG000894.1 Alligator sinensis Alligator_sinensis_CCG000894.1 I
Alligator_sinensis_CCG004283.1 Alligator sinensis Alligator_sinensis_CCG004283.1 I
Alligator_sinensis_CCG009651.1 Alligator sinensis Alligator_sinensis_CCG009651.1 I
atf3 Tetraodon nigroviridis ENSTNIG00000002524 I
Brh_R007294 Buceros rhinoceros Brh_R007294 I
c-fos Oryzias latipes ENSORLG00000017502 I
Cmyd_10002048 Chelonia mydas Cmyd_10002048 I
Cmyd_10013210 Chelonia mydas Cmyd_10013210 I
Cmyd_10014529 Chelonia mydas Cmyd_10014529 I
ENSAMEG00000012405 Ailuropoda melanoleuca ENSAMEG00000012405 I
ENSAMEG00000015695 Ailuropoda melanoleuca ENSAMEG00000015695 I
ENSAMEG00000017284 Ailuropoda melanoleuca ENSAMEG00000017284 I
ENSAMEG00000018335 Ailuropoda melanoleuca ENSAMEG00000018335 I
ENSAMXG00000008191 Astyanax mexicanus ENSAMXG00000008191 I
ENSAMXG00000013765 Astyanax mexicanus ENSAMXG00000013765 I
ENSAMXG00000013783 Astyanax mexicanus ENSAMXG00000013783 I
ENSAMXG00000014513 Astyanax mexicanus ENSAMXG00000014513 I
ENSAMXG00000015019 Astyanax mexicanus ENSAMXG00000015019 I
ENSAMXG00000018054 Astyanax mexicanus ENSAMXG00000018054 I
ENSAPLG00000009204 Anas platyrhynchos ENSAPLG00000009204 I
ENSAPLG00000011284 Anas platyrhynchos ENSAPLG00000011284 I
ENSBTAP00000005660-D1 Bos grunniens ENSBTAP00000005660-D1 I
ENSBTAP00000010762-D1 Bos grunniens ENSBTAP00000010762-D1 I
ENSBTAP00000032838-D1 Bos grunniens ENSBTAP00000032838-D1 I
ENSCPOG00000003247 Cavia porcellus ENSCPOG00000003247 I
ENSCPOG00000007491 Cavia porcellus ENSCPOG00000007491 I
ENSCPOG00000020774 Cavia porcellus ENSCPOG00000020774 I
ENSCSAG00000008055 Chlorocebus sabaeus ENSCSAG00000008055 I
ENSCSAG00000010278 Chlorocebus sabaeus ENSCSAG00000010278 I
ENSCSAG00000012136 Chlorocebus sabaeus ENSCSAG00000012136 I
ENSDORG00000003738 Dipodomys ordii ENSDORG00000003738 I
ENSDORG00000008993 Dipodomys ordii ENSDORG00000008993 I
ENSETEG00000017818 Echinops telfairi ENSETEG00000017818 I
ENSFALG00000006355 Ficedula albicollis ENSFALG00000006355 I
ENSFALG00000012753 Ficedula albicollis ENSFALG00000012753 I
ENSGMOG00000002017 Gadus morhua ENSGMOG00000002017 I
ENSGMOG00000003382 Gadus morhua ENSGMOG00000003382 I
ENSGMOG00000011046 Gadus morhua ENSGMOG00000011046 I
ENSGMOG00000011052 Gadus morhua ENSGMOG00000011052 I
ENSGMOG00000015393 Gadus morhua ENSGMOG00000015393 I
ENSLACG00000007288 Latimeria chalumnae ENSLACG00000007288 I
ENSLACG00000013070 Latimeria chalumnae ENSLACG00000013070 I
ENSLACG00000013874 Latimeria chalumnae ENSLACG00000013874 I
ENSLACG00000018157 Latimeria chalumnae ENSLACG00000018157 I
ENSLOCG00000000771 Lepisosteus oculatus ENSLOCG00000000771 I
ENSLOCG00000010507 Lepisosteus oculatus ENSLOCG00000010507 I
ENSLOCG00000010517 Lepisosteus oculatus ENSLOCG00000010517 I
ENSLOCG00000014630 Lepisosteus oculatus ENSLOCG00000014630 I
ENSLOCG00000017169 Lepisosteus oculatus ENSLOCG00000017169 I
ENSMEUG00000010422 Macropus eugenii ENSMEUG00000010422 I
ENSMEUG00000012081 Macropus eugenii ENSMEUG00000012081 I
ENSMICG00000001423 Microcebus murinus ENSMICG00000001423 I
ENSMMUG00000010574 Macaca mulatta ENSMMUG00000010574 I
ENSMPUG00000005914 Mustela putorius furo ENSMPUG00000005914 I
ENSMPUG00000009153 Mustela putorius furo ENSMPUG00000009153 I
ENSMPUG00000011433 Mustela putorius furo ENSMPUG00000011433 I
ENSMPUG00000017989 Mustela putorius furo ENSMPUG00000017989 I
ENSNLEG00000002090 Nomascus leucogenys ENSNLEG00000002090 I
ENSNLEG00000005945 Nomascus leucogenys ENSNLEG00000005945 I
ENSNLEG00000015308 Nomascus leucogenys ENSNLEG00000015308 I
ENSNLEG00000016463 Nomascus leucogenys ENSNLEG00000016463 I
ENSOARG00000000072 Ovis aries ENSOARG00000000072 I
ENSOARG00000001783 Ovis aries ENSOARG00000001783 I
ENSOARG00000009983 Ovis aries ENSOARG00000009983 I
ENSOARG00000019483 Ovis aries ENSOARG00000019483 I
ENSOCUG00000023019 Oryctolagus cuniculus ENSOCUG00000023019 I
ENSONIG00000003711 Oreochromis niloticus ENSONIG00000003711 I
ENSONIG00000005463 Oreochromis niloticus ENSONIG00000005463 I
ENSONIG00000015264 Oreochromis niloticus ENSONIG00000015264 I
ENSONIG00000015266 Oreochromis niloticus ENSONIG00000015266 I
ENSONIG00000019549 Oreochromis niloticus ENSONIG00000019549 I
ENSONIG00000020185 Oreochromis niloticus ENSONIG00000020185 I
ENSP00000245919 Macaca fascicularis ENSP00000245919 I
ENSP00000264716 Macaca fascicularis ENSP00000264716 I
ENSP00000306245 Macaca fascicularis ENSP00000306245 I
ENSP00000310170 Macaca fascicularis ENSP00000310170 I
ENSP00000310170-D1 Bos grunniens ENSP00000310170-D1 I
ENSPANG00000002665 Papio anubis ENSPANG00000002665 I
ENSPANG00000016424 Papio anubis ENSPANG00000016424 I
ENSPANG00000020551 Papio anubis ENSPANG00000020551 I
ENSPANG00000023125 Papio anubis ENSPANG00000023125 I
ENSPFOG00000007924 Poecilia formosa ENSPFOG00000007924 I
ENSPFOG00000010300 Poecilia formosa ENSPFOG00000010300 I
ENSPFOG00000010981 Poecilia formosa ENSPFOG00000010981 I
ENSPFOG00000015030 Poecilia formosa ENSPFOG00000015030 I
ENSPFOG00000021864 Poecilia formosa ENSPFOG00000021864 I
ENSPFOG00000022460 Poecilia formosa ENSPFOG00000022460 I
ENSPMAG00000000424 Petromyzon marinus ENSPMAG00000000424 I
ENSPMAG00000003458 Petromyzon marinus ENSPMAG00000003458 I
ENSPMAG00000008546 Petromyzon marinus ENSPMAG00000008546 I
ENSPPYG00000003041 Pongo abelii ENSPPYG00000003041 I
ENSPPYG00000006002 Pongo abelii ENSPPYG00000006002 I
ENSPPYG00000010121 Pongo abelii ENSPPYG00000010121 I
ENSPSIG00000003008 Pelodiscus sinensis ENSPSIG00000003008 I
ENSPSIG00000003916 Pelodiscus sinensis ENSPSIG00000003916 I
ENSPSIG00000005821 Pelodiscus sinensis ENSPSIG00000005821 I
ENSPSIG00000017598 Pelodiscus sinensis ENSPSIG00000017598 I
ENSSHAG00000002406 Sarcophilus harrisii ENSSHAG00000002406 I
ENSSHAG00000017780 Sarcophilus harrisii ENSSHAG00000017780 I
ENSSSCG00000027396 Sus scrofa ENSSSCG00000027396 I
ENSSTOG00000003005 Ictidomys tridecemlineatus ENSSTOG00000003005 I
ENSSTOG00000003296 Ictidomys tridecemlineatus ENSSTOG00000003296 I
ENSSTOG00000022839 Ictidomys tridecemlineatus ENSSTOG00000022839 I
ENSSTOG00000028949 Ictidomys tridecemlineatus ENSSTOG00000028949 I
ENSTBEG00000007122 Tupaia belangeri ENSTBEG00000007122 I
ENSTSYG00000008393 Tarsius syrichta ENSTSYG00000008393 I
ENSTSYG00000013658 Tarsius syrichta ENSTSYG00000013658 I
ENSXMAG00000013157 Xiphophorus maculatus ENSXMAG00000013157 I
ENSXMAG00000013196 Xiphophorus maculatus ENSXMAG00000013196 I
ENSXMAG00000014809 Xiphophorus maculatus ENSXMAG00000014809 I
ENSXMAG00000018459 Xiphophorus maculatus ENSXMAG00000018459 I
ENSXMAG00000018663 Xiphophorus maculatus ENSXMAG00000018663 I
estExt_gwp.C_680102 Branchiostoma floridae estExt_gwp.C_680102 I
FOS Anolis carolinensis ENSACAG00000016921 I
FOS Bos taurus ENSBTAG00000004322 I
FOS Canis familiaris ENSCAFG00000017040 I
FOS Callithrix jacchus ENSCJAG00000020633 I
FOS Dasypus novemcinctus ENSDNOG00000031516 I
FOS Equus caballus ENSECAG00000014260 I
FOS Erinaceus europaeus ENSEEUG00000013514 I
FOS Felis catus ENSFCAG00000025370 I
FOS Homo sapiens ENSG00000170345 D
FOS Gallus gallus ENSGALG00000028037 I
FOS Gorilla gorilla ENSGGOG00000000527 I
FOS Microcebus murinus ENSMICG00000016026 I
FOS Myotis lucifugus ENSMLUG00000003729 I
FOS Monodelphis domestica ENSMODG00000005927 I
Fos Mus musculus ENSMUSG00000021250 D
FOS Ornithorhynchus anatinus ENSOANG00000005064 I
FOS Oryctolagus cuniculus ENSOCUG00000021506 I
FOS Otolemur garnettii ENSOGAG00000032356 I
FOS Ochotona princeps ENSOPRG00000012005 I
FOS Procavia capensis ENSPCAG00000001765 I
FOS Pan troglodytes ENSPTRG00000006553 I
FOS Pteropus vampyrus ENSPVAG00000000671 I
Fos Rattus norvegicus ENSRNOG00000008015 I
FOS Sus scrofa ENSSSCG00000002383 I
FOS Taeniopygia guttata ENSTGUG00000012217 I
FOS Tursiops truncatus ENSTTRG00000007779 I
FOS Vicugna pacos ENSVPAG00000003894 I
fos Xenopus tropicalis XB-GENE-866811 I
fos.L Xenopus laevis XB-GENE-17337595 I
fos.S Xenopus laevis XB-GENE-866822 I
fosaa Danio rerio ENSDARG00000040135 I
fosaa Gasterosteus aculeatus ENSGACG00000007617 I
fosaa Oryzias latipes ENSORLG00000016509 I
fosaa Tetraodon nigroviridis ENSTNIG00000017405 I
fosaa Takifugu rubripes ENSTRUG00000018314 I
fosab Danio rerio ENSDARG00000031683 I
fosab Tetraodon nigroviridis ENSTNIG00000016357 I
fosab Takifugu rubripes ENSTRUG00000010579 I
FOSB Bos taurus ENSBTAG00000008182 I
FOSB Canis familiaris ENSCAFG00000004443 I
FOSB Callithrix jacchus ENSCJAG00000012636 I
FOSB Cavia porcellus ENSCPOG00000015608 I
fosb Danio rerio ENSDARG00000055751 I
FOSB Dasypus novemcinctus ENSDNOG00000008748 I
Fosb Dipodomys ordii ENSDORG00000008112 I
FOSB Equus caballus ENSECAG00000018002 I
FOSB Felis catus ENSFCAG00000030571 I
FOSB Homo sapiens ENSG00000125740 D
fosb Gasterosteus aculeatus ENSGACG00000009792 I
FOSB Gorilla gorilla ENSGGOG00000010952 I
FOSB Loxodonta africana ENSLAFG00000008834 I
FOSB Microcebus murinus ENSMICG00000001809 I
FOSB Myotis lucifugus ENSMLUG00000009003 I
FOSB Monodelphis domestica ENSMODG00000021545 I
Fosb Mus musculus ENSMUSG00000003545 D
FOSB Otolemur garnettii ENSOGAG00000013790 I
FOSB Oryzias latipes ENSORLG00000006665 I
FOSB Procavia capensis ENSPCAG00000007461 I
FOSB Pteropus vampyrus ENSPVAG00000001332 I
Fosb Rattus norvegicus ENSRNOG00000046667 I
FOSB Tupaia belangeri ENSTBEG00000010222 I
fosb Tetraodon nigroviridis ENSTNIG00000007735 I
fosb Takifugu rubripes ENSTRUG00000010593 I
FOSB Tursiops truncatus ENSTTRG00000008316 I
FOSB Vicugna pacos ENSVPAG00000010030 I
fosb Xenopus tropicalis XB-GENE-6258697 I
FOSL1 Anolis carolinensis ENSACAG00000010103 I
FOSL1 Bos taurus ENSBTAG00000006194 I
FOSL1 Canis familiaris ENSCAFG00000013132 I
FOSL1 Callithrix jacchus ENSCJAG00000001776 I
FOSL1 Dasypus novemcinctus ENSDNOG00000003173 I
Fosl1 Dipodomys ordii ENSDORG00000009958 I
FOSL1 Equus caballus ENSECAG00000023092 I
FOSL1 Felis catus ENSFCAG00000013275 I
FOSL1 Homo sapiens ENSG00000175592 D
FOSL1 Gorilla gorilla ENSGGOG00000011411 I
FOSL1 Loxodonta africana ENSLAFG00000001766 I
FOSL1 Microcebus murinus ENSMICG00000012846 I
FOSL1 Myotis lucifugus ENSMLUG00000011050 I
FOSL1 Macaca mulatta ENSMMUG00000008653 I
Fosl1 Mus musculus ENSMUSG00000024912 D
FOSL1 Oryctolagus cuniculus ENSOCUG00000011143 I
FOSL1 Otolemur garnettii ENSOGAG00000016518 I
FOSL1 Ochotona princeps ENSOPRG00000000605 I
FOSL1 Procavia capensis ENSPCAG00000011049 I
FOSL1 Pan troglodytes ENSPTRG00000003901 I
FOSL1 Pteropus vampyrus ENSPVAG00000016964 I
Fosl1 Rattus norvegicus ENSRNOG00000020552 I
FOSL1 Sus scrofa ENSSSCG00000012967 I
FOSL1 Tursiops truncatus ENSTTRG00000016937 I
fosl1 Xenopus tropicalis XB-GENE-6257957 I
fosl1a Danio rerio ENSDARG00000015355 I
fosl1a Gasterosteus aculeatus ENSGACG00000017059 I
fosl1a Oryzias latipes ENSORLG00000002045 I
fosl1a Tetraodon nigroviridis ENSTNIG00000016821 I
fosl1a Takifugu rubripes ENSTRUG00000012068 I
FOSL2 Anolis carolinensis ENSACAG00000009506 I
FOSL2 Bos taurus ENSBTAG00000023929 I
FOSL2 Canis familiaris ENSCAFG00000005212 I
FOSL2 Callithrix jacchus ENSCJAG00000009019 I
fosl2 Danio rerio ENSDARG00000040623 I
FOSL2 Equus caballus ENSECAG00000017657 I
FOSL2 Erinaceus europaeus ENSEEUG00000007937 I
FOSL2 Echinops telfairi ENSETEG00000011721 I
FOSL2 Felis catus ENSFCAG00000029462 I
FOSL2 Homo sapiens ENSG00000075426 D
fosl2 Gasterosteus aculeatus ENSGACG00000012956 I
FOSL2 Gallus gallus ENSGALG00000010036 I
FOSL2 Gorilla gorilla ENSGGOG00000009435 I
FOSL2 Loxodonta africana ENSLAFG00000009035 I
FOSL2 Meleagris gallopavo ENSMGAG00000010468 I
FOSL2 Myotis lucifugus ENSMLUG00000000200 I
FOSL2 Macaca mulatta ENSMMUG00000014464 I
Fosl2 Mus musculus ENSMUSG00000029135 D
FOSL2 Oryctolagus cuniculus ENSOCUG00000010706 I
FOSL2 Otolemur garnettii ENSOGAG00000007339 I
FOSL2 Ochotona princeps ENSOPRG00000011952 I
fosl2 Oryzias latipes ENSORLG00000018204 I
FOSL2 Procavia capensis ENSPCAG00000007502 I
Fosl2 Rattus norvegicus ENSRNOG00000052357 I
FOSL2 Tupaia belangeri ENSTBEG00000002195 I
FOSL2 Taeniopygia guttata ENSTGUG00000002556 I
fosl2 Tetraodon nigroviridis ENSTNIG00000018774 I
fosl2 Takifugu rubripes ENSTRUG00000006404 I
FOSL2 Tursiops truncatus ENSTTRG00000012544 I
fosl2 Xenopus tropicalis XB-GENE-6258093 I
fosl2.L Xenopus laevis XB-GENE-6252038 I
Gfo_R010997 Geospiza fortis Gfo_R010997 I
Myotis_brandtii_Fosb_10006013 Myotis brandtii Myotis_brandtii_Fosb_10006013 I
Myotis_brandtii_FOSL1_10030743 Myotis brandtii Myotis_brandtii_FOSL1_10030743 I
Myotis_brandtii_FOSL2_10031162 Myotis brandtii Myotis_brandtii_FOSL2_10031162 I
Myotis_brandtii_FOS_10012946 Myotis brandtii Myotis_brandtii_FOS_10012946 I
NEMVEDRAFT_v1g232694 Nematostella vectensis NEMVEDRAFT_v1g232694 I
Ogr08028 Ophisaurus gracilis Ogr08028 I
Ogr13525 Ophisaurus gracilis Ogr13525 I
Pvit_01215 Pogona vitticeps Pvit_01215 I
Pvit_05292 Pogona vitticeps Pvit_05292 I
Pvit_16646 Pogona vitticeps Pvit_16646 I
Pvit_16996 Pogona vitticeps Pvit_16996 I
si:ch211-153j24.3 Danio rerio ENSDARG00000068428 I
si:ch211-153j24.3 Gasterosteus aculeatus ENSGACG00000010481 I
si:ch211-153j24.3 Tetraodon nigroviridis ENSTNIG00000016356 I
si:ch211-153j24.3 Takifugu rubripes ENSTRUG00000010431 I
si:ch211-59d15.4 Danio rerio ENSDARG00000092174 I
Tal_R012094 Tyto alba Tal_R012094 I