CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cucsa.160520
(
Cucumis sativus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Cucsa.160520
T196051_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.160520.1
GATA
204
241
CQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTL
Cucsa.160520.2
GATA
204
241
CQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTL
Cucsa.160520.3
GATA
204
241
CQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTL
Cucsa.160520.4
GATA
204
241
CQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTL
Cucsa.160520.5
GATA
204
241
CQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTL
Cucsa.160520.6
GATA
204
241
CQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTL
Cucsa.160520.7
GATA
204
241
CQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTL
Links
Other
GATA
family TFs
Other
Cucumis sativus
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_07782
Schistosoma haematobium
A_07782
N
csin102807
Clonorchis sinensis
csin102807
N
D915_02053
Fasciola hepatica
D915_02053
N
ECPE_0000696401
Echinostoma caproni
ECPE_0000696401
N
SCUD_0001150501
Schistosoma curassoni
SCUD_0001150501
N
Sjc_0095070
Schistosoma japonicum
Sjc_0095070
N
Smp_125400
Schistosoma mansoni
Smp_125400
N
SMRZ_0001505301
Schistosoma margrebowiei
SMRZ_0001505301
N
SMTD_0001086501
Schistosoma mattheei
SMTD_0001086501
N
SPER_0002114601
Spirometra erinaceieuropaei
SPER_0002114601
N
SROB_0001540501
Schistosoma rodhaini
SROB_0001540501
N
SSLN_0002064601
Schistocephalus solidus
SSLN_0002064601
N
T265_11279
Opisthorchis viverrini
T265_11279
N