CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_60454
(
Mycosphaerella fijiensis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
estExt_Genewise1Plus.C_60454
T196178_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-1
M01236_2.00
Neurospora crassa
MCGATCGM
KCGATCGK
PBM
Lambert et al.(2019)
pTH9706
0.839
0.882
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_60454
GATA
657
690
CANCHTRVTPEWRRGPSGQRDLCNSCGLRWAKLV
Links
Other
GATA
family TFs
Other
Mycosphaerella fijiensis
TFs
124 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CADANGAG00005210
Aspergillus niger
CADANGAG00005210
N
CADAORAG00012109
Aspergillus oryzae
CADAORAG00012109
N
e_gw1.00086.63.1
Aspergillus carbonarius
e_gw1.00086.63.1
N
NFIA_112650
Neosartorya fischeri
CADNFIAG00010520
N
Pc22g24260
Penicillium chrysogenum
Pc22g24260
N
PCH_Pc22g24260
Penicillium rubens
PCH_Pc22g24260
N
U727_00434280711
Penicillium solitum
U727_00434280711
N