fgenesh1_kg.sca_1_chr1_3_0000076 (Nectria haematococca)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 fgenesh1_kg.sca_1_chr1_3_0000076 T196191_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
wc-2
M02016_2.00 		Neurospora crassa
NNHGATNNN
NNNATCDNN		 PBM
Weirauch et al.(2014)
pTH8611 		0.867 1.000
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_kg.sca_1_chr1_3_0000076 GATA 402 437

Links

Other GATA family TFs
Other Nectria haematococca TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F443_00627 Phytophthora parasitica F443_00627 N
maker-par_contig_10149-snap-gene-0.0 Pythium arrhenomanes maker-par_contig_10149-snap-gene-0.0 N
maker-par_contig_572-fgenesh-gene-0.5 Pythium arrhenomanes maker-par_contig_572-fgenesh-gene-0.5 N
maker-pir_contig_493-snap-gene-0.11 Pythium irregulare maker-pir_contig_493-snap-gene-0.11 N
maker-pve_contig_397-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_397-fgenesh-gene-0.0 N
Phyra85498 Phytophthora ramorum Phyra85498 N
Physo138283 Phytophthora sojae Physo138283 N
PYU1_G002992 Pythium ultimum PYU1_G002992 N
snap_masked-pve_contig_397-abinit-gene-0.26 Pythium vexans snap_masked-pve_contig_397-abinit-gene-0.26 N