CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgeneshPB_pg.5__510
(
Phycomyces blakesleeanus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
fgeneshPB_pg.5__510
T196275_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sre
M01237_2.00
Neurospora crassa
NHGATHWN
NWDATCDN
PBM
Lambert et al.(2019)
pTH11832
0.802
0.671
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshPB_pg.5__510
GATA
497
531
CSNCDTTSTPLWRRSVQDELLCNACGLYLKLHNAP
fgeneshPB_pg.5__510
GATA
556
590
CSNCKTNTTPLWRRDIEGQSLCNACGLYLKLHHEK
Links
Other
GATA
family TFs
Other
Phycomyces blakesleeanus
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_01720
Beauveria bassiana
BBA_01720
I
0.807
CCM_04145
Cordyceps militaris
CCM_04145
I
0.802
CTHT_0034490
Chaetomium thermophilum
CTHT_0034490
I
0.802
estExt_Genewise1.C_31450
Neurospora discreta
estExt_Genewise1.C_31450
I
0.802
e_gw1.18.217.1
Nectria haematococca
e_gw1.18.217.1
I
0.802
FFUJ_04434
Fusarium fujikuroi
FFUJ_04434
I
0.802
fgeneshPB_pg.72__18
Phycomyces blakesleeanus
fgeneshPB_pg.72__18
N
0.853
fgeneshPB_pg.9__341
Phycomyces blakesleeanus
fgeneshPB_pg.9__341
N
0.845
FGRRES_09565
Fusarium graminearum
FGRRES_09565
I
0.802
FOXG_06266
Fusarium oxysporum
FOXG_06266
I
0.802
FPSE_00936
Fusarium pseudograminearum
FPSE_00936
I
0.802
FVEG_04118
Fusarium verticillioides
FVEG_04118
I
0.802
GGTG_08766
Gaeumannomyces graminis
GGTG_08766
I
0.802
MAPG_05020
Magnaporthe poae
MAPG_05020
I
0.802
MGG_01840
Magnaporthe oryzae
MGG_01840
I
0.802
MYCTH_2298578
Myceliophthora thermophila
MYCTH_2298578
I
0.802
NechaG32931
Fusarium solani
NechaG32931
I
0.802
NEUTE1DRAFT_59972
Neurospora tetrasperma
NEUTE1DRAFT_59972
I
0.802
OCS_04920
Ophiocordyceps sinensis
OCS_04920
I
0.802
PFICI_05672
Pestalotiopsis fici
PFICI_05672
I
0.802
PODANS_6_1720
Podospora anserina
PODANS_6_1720
I
0.802
RO3G_05737
Rhizopus oryzae
RO3G_05737
N
0.843
RO3G_15635
Rhizopus oryzae
RO3G_15635
N
0.850
SPPG_04393
Spizellomyces punctatus
SPPG_04393
N
0.849
SPPG_06547
Spizellomyces punctatus
SPPG_06547
N
0.851
sre
Neurospora crassa
NCU07728
D
0.802
THITE_2114956
Thielavia terrestris
THITE_2114956
I
0.802
TRIATDRAFT_174504
Trichoderma atroviride
TRIATDRAFT_174504
I
0.802
TRIREDRAFT_4231
Trichoderma reesei
TRIREDRAFT_4231
I
0.802
TRIVIDRAFT_192933
Trichoderma virens
TRIVIDRAFT_192933
I
0.802