CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgeneshPB_pg.72__18
(
Phycomyces blakesleeanus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
fgeneshPB_pg.72__18
T196278_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshPB_pg.72__18
GATA
473
507
CSNCSTTSTPLWRRSAEDDLLCNACGLYLKLHNAP
fgeneshPB_pg.72__18
GATA
534
568
CTNCRTTTTPLWRRDLKGNPLCNACGLYLKLHNEK
Links
Other
GATA
family TFs
Other
Phycomyces blakesleeanus
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgeneshPB_pg.5__510
Phycomyces blakesleeanus
fgeneshPB_pg.5__510
I
0.853
fgeneshPB_pg.9__341
Phycomyces blakesleeanus
fgeneshPB_pg.9__341
N
0.844
RO3G_05737
Rhizopus oryzae
RO3G_05737
N
0.842
RO3G_15635
Rhizopus oryzae
RO3G_15635
N
0.851
SPPG_04393
Spizellomyces punctatus
SPPG_04393
N
0.846
SPPG_06547
Spizellomyces punctatus
SPPG_06547
N
0.851