Eucgr.H04023 (Eucalyptus grandis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Eucgr.H04023 T196527_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.838 0.889
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.818 0.889
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.818 0.889
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.H04023.1 GATA 31 66

Links

Other GATA family TFs
Other Eucalyptus grandis TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA026216 Oryza indica BGIOSGA026216 I
BRADI1G20210 Brachypodium distachyon BRADI1G20210 I
BRADI1G61477 Brachypodium distachyon BRADI1G61477 I
F775_06570 Aegilops tauschii F775_06570 I
GRMZM2G026417 Zea mays GRMZM2G026417 I
GRMZM2G030458 Zea mays GRMZM2G030458 I
GRMZM2G075122 Zea mays GRMZM2G075122 I
GRMZM2G082318 Zea mays GRMZM2G082318 I
LPERR07G20450 Leersia perrieri LPERR07G20450 I
MLOC_10638 Hordeum vulgare MLOC_10638 I
OB07G29080 Oryza brachyantha OB07G29080 I
OBART07G23470 Oryza barthii OBART07G23470 I
OGLUM03G19400 Oryza glumaepatula OGLUM03G19400 I
OGLUM07G23550 Oryza glumaepatula OGLUM07G23550 I
OMERI03G17110 Oryza meridionalis OMERI03G17110 I
OMERI07G19920 Oryza meridionalis OMERI07G19920 I
ONIVA04G28640 Oryza nivara ONIVA04G28640 I
ONIVA07G23260 Oryza nivara ONIVA07G23260 I
OPUNC03G17850 Oryza punctata OPUNC03G17850 I
OPUNC07G22140 Oryza punctata OPUNC07G22140 I
ORGLA03G0177400 Oryza glaberrima ORGLA03G0177400 I
ORGLA07G0264000 Oryza glaberrima ORGLA07G0264000 I
ORUFI07G24680 Oryza rufipogon ORUFI07G24680 I
OS03G0370250 Oryza sativa OS03G0370250 D
OS07G0636100 Oryza sativa OS07G0636100 I
Pavir.Ba00022 Panicum virgatum Pavir.Ba00022 I
Pavir.Bb03462 Panicum virgatum Pavir.Bb03462 I
Pavir.Ib01769 Panicum virgatum Pavir.Ib01769 I
Pavir.J23796 Panicum virgatum Pavir.J23796 I
Sb01g034370 Sorghum bicolor Sb01g034370 I
Sb02g040550 Sorghum bicolor Sb02g040550 I
Si030239m.g Setaria italica Si030239m.g I
Traes_2AS_8C5E619C6 Triticum aestivum Traes_2AS_8C5E619C6 I
Traes_2BS_EEE045515 Triticum aestivum Traes_2BS_EEE045515 I
Traes_2DS_6BAF1825F Triticum aestivum Traes_2DS_6BAF1825F I
Traes_4AS_928691B39 Triticum aestivum Traes_4AS_928691B39 I
Traes_4BS_96AE357C6 Triticum aestivum Traes_4BS_96AE357C6 I
Traes_4DL_21C202E37 Triticum aestivum Traes_4DL_21C202E37 I
TRIUR3_32773 Triticum urartu TRIUR3_32773 I