CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_74.95
(
Carica papaya
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
evm.TU.supercontig_74.95
T196554_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GATA26
M02001_2.00
Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN
PBM
Weirauch et al.(2014)
pTH7490
0.827
0.875
GATA27
M02005_2.00
Arabidopsis thaliana
NNGATBNNN
NNNVATCNN
PBM
Weirauch et al.(2014)
pTH7492
0.827
0.875
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_74.95
GATA
22
53
NNASTPLWRNGPPEKPVLCNACGSRWRTKGTL
Links
Other
GATA
family TFs
Other
Carica papaya
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R009152
Calypte anna
Aan_R009152
N
Afo_R007427
Aptenodytes forsteri
Afo_R007427
N
Alligator_sinensis_CCG000684.1
Alligator sinensis
Alligator_sinensis_CCG000684.1
N
ENSAMEG00000002510
Ailuropoda melanoleuca
ENSAMEG00000002510
N
ENSAPLG00000015041
Anas platyrhynchos
ENSAPLG00000015041
N
ENSCSAG00000004263
Chlorocebus sabaeus
ENSCSAG00000004263
N
ENSDORG00000002406
Dipodomys ordii
ENSDORG00000002406
N
ENSLACG00000004968
Latimeria chalumnae
ENSLACG00000004968
N
ENSMEUG00000004670
Macropus eugenii
ENSMEUG00000004670
N
ENSMPUG00000007877
Mustela putorius furo
ENSMPUG00000007877
N
ENSNLEG00000005746
Nomascus leucogenys
ENSNLEG00000005746
N
ENSOARG00000003811
Ovis aries
ENSOARG00000003811
N
ENSP00000398089
Macaca fascicularis
ENSP00000398089
N
ENSP00000398089-D1
Bos grunniens
ENSP00000398089-D1
N
ENSPANG00000007150
Papio anubis
ENSPANG00000007150
N
ENSPPYG00000007523
Pongo abelii
ENSPPYG00000007523
N
ENSSHAG00000017183
Sarcophilus harrisii
ENSSHAG00000017183
N
ENSSSCG00000021002
Sus scrofa
ENSSSCG00000021002
N
ENSSTOG00000015313
Ictidomys tridecemlineatus
ENSSTOG00000015313
N
ENSTSYG00000014686
Tarsius syrichta
ENSTSYG00000014686
N
Myotis_brandtii_ZNF821_10022420
Myotis brandtii
Myotis_brandtii_ZNF821_10022420
N
Ogr16857
Ophisaurus gracilis
Ogr16857
N
Pvit_16264
Pogona vitticeps
Pvit_16264
N
Zfp821
Mus musculus
ENSMUSG00000031728
N
Zfp821
Rattus norvegicus
ENSRNOG00000000262
N
ZNF821
Bos taurus
ENSBTAG00000021438
N
ZNF821
Ornithorhynchus anatinus
ENSOANG00000008189
N
ZNF821
Canis familiaris
ENSCAFG00000020210
N
ZNF821
Choloepus hoffmanni
ENSCHOG00000000514
N
ZNF821
Cavia porcellus
ENSCPOG00000005644
N
ZNF821
Dasypus novemcinctus
ENSDNOG00000047259
N
ZNF821
Equus caballus
ENSECAG00000008472
N
ZNF821
Erinaceus europaeus
ENSEEUG00000003059
N
ZNF821
Felis catus
ENSFCAG00000011073
N
ZNF821
Vicugna pacos
ENSVPAG00000002914
N
ZNF821
Tursiops truncatus
ENSTTRG00000001899
N
ZNF821
Homo sapiens
ENSG00000102984
D
ZNF821
Tupaia belangeri
ENSTBEG00000011534
N
ZNF821
Gorilla gorilla
ENSGGOG00000005863
N
ZNF821
Loxodonta africana
ENSLAFG00000016315
N
ZNF821
Sus scrofa
ENSSSCG00000002741
N
ZNF821
Myotis lucifugus
ENSMLUG00000013825
N
ZNF821
Sorex araneus
ENSSARG00000006676
N
ZNF821
Pteropus vampyrus
ENSPVAG00000010249
N
ZNF821
Pan troglodytes
ENSPTRG00000008328
N
ZNF821
Macaca mulatta
ENSMMUG00000016716
N
ZNF821
Procavia capensis
ENSPCAG00000006757
N
ZNF821
Monodelphis domestica
ENSMODG00000002425
N
ZNF821
Ochotona princeps
ENSOPRG00000001338
N
ZNF821
Otolemur garnettii
ENSOGAG00000007248
N
ZNF821
Oryctolagus cuniculus
ENSOCUG00000009019
N