gene14763-v1.0-hybrid (Fragaria vesca)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 gene14763-v1.0-hybrid T196566_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.867 1.000
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.867 1.000
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.825 0.944
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.825 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna14763.1-v1.0-hybrid GATA 80 115

Links

Other GATA family TFs
Other Fragaria vesca TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CADAFLAG00007309 Aspergillus flavus CADAFLAG00007309 N
FFUJ_14901 Fusarium fujikuroi FFUJ_14901 N
fgenesh1_pg.sca_15_chr12_5_0000067 Nectria haematococca fgenesh1_pg.sca_15_chr12_5_0000067 N