Gorai.003G014300 (Gossypium raimondii)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Gorai.003G014300 T196582_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.867 1.000
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.867 1.000
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.825 0.944
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.825 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.003G014300.1 GATA 134 169

Links

Other GATA family TFs
Other Gossypium raimondii TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_01402 Aspergillus nidulans CADANIAG00001203 N
BDDG_08272 Blastomyces dermatitidis BDDG_08272 N
CGGC5_9554 Colletotrichum gloeosporioides CGGC5_9554 N
Cob_10954 Colletotrichum orbiculare Cob_10954 N
EV44_g2000 Erysiphe necator EV44_g2000 N
GMDG_02644 Pseudogymnoascus destructans GMDG_02644 N
MBM_05037 Marssonina brunnea MBM_05037 N
NFIA_016950 Neosartorya fischeri CADNFIAG00001487 N
PAAG_11083 Paracoccidioides sp lutzii PAAG_11083 N
PABG_06594 Paracoccidioides brasiliensis PABG_06594 N
PEX1_039750 Penicillium expansum PEX1_039750 N
PITC_099380 Penicillium italicum PITC_099380 N
SAPIO_CDS10703 Scedosporium apiospermum SAPIO_CDS10703 N
SBOR_8201 Sclerotinia borealis SBOR_8201 N
SS1G_03805 Sclerotinia sclerotiorum SS1G_03805 N
U727_00431841361 Penicillium solitum U727_00431841361 N
V499_03251 Pseudogymnoascus pannorum V499_03251 N
Z517_03846 Fonsecaea pedrosoi Z517_03846 N