Lus10011008.g (Linum usitatissimum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Lus10011008.g T196630_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA26
M02001_2.00 		Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN		 PBM
Weirauch et al.(2014)
pTH7490 		0.867 0.972
GATA27
M02005_2.00 		Arabidopsis thaliana
NNGATBNNN
NNNVATCNN		 PBM
Weirauch et al.(2014)
pTH7492 		0.867 0.972
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10011008 GATA 7 42

Links

Other GATA family TFs
Other Linum usitatissimum TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gw1.9.51.1 Mycosphaerella fijiensis gw1.9.51.1 N 0.000
MYCFIDRAFT_203337 Pseudocercospora fijiensis MYCFIDRAFT_203337 N 0.000
S40288_09051 Stachybotrys chartarum S40288_09051 N 0.000
SMAC_05852 Sordaria macrospora SMAC_05852 N 0.000