MDP0000253174 (Malus domestica)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 MDP0000253174 T196675_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.867 1.000
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.867 1.000
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.825 0.944
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.825 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000253174 GATA 153 188

Links

Other GATA family TFs
Other Malus domestica TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000014907 Ailuropoda melanoleuca ENSAMEG00000014907 I
ENSAMXG00000015946 Astyanax mexicanus ENSAMXG00000015946 I
ENSCAFG00000023067 Canis familiaris ENSCAFG00000023067 I
ENSCAFG00000029639 Canis familiaris ENSCAFG00000029639 I
ENSCSAG00000007182 Chlorocebus sabaeus ENSCSAG00000007182 I
ENSECAG00000008677 Equus caballus ENSECAG00000008677 I
ENSECAG00000008708 Equus caballus ENSECAG00000008708 I
ENSECAG00000009495 Equus caballus ENSECAG00000009495 I
ENSFALG00000014220 Ficedula albicollis ENSFALG00000014220 I
ENSGMOG00000013287 Gadus morhua ENSGMOG00000013287 I
ENSLACG00000015426 Latimeria chalumnae ENSLACG00000015426 I
ENSLOCG00000002988 Lepisosteus oculatus ENSLOCG00000002988 I
ENSMEUG00000007286 Macropus eugenii ENSMEUG00000007286 I
ENSMLUG00000015387 Myotis lucifugus ENSMLUG00000015387 I
ENSMLUG00000022730 Myotis lucifugus ENSMLUG00000022730 I
ENSMMUG00000002887 Macaca mulatta ENSMMUG00000002887 I
ENSNLEG00000013483 Nomascus leucogenys ENSNLEG00000013483 I
ENSOARG00000003920 Ovis aries ENSOARG00000003920 I
ENSOGAG00000026441 Otolemur garnettii ENSOGAG00000026441 I
ENSP00000359444 Macaca fascicularis ENSP00000359444 I
ENSPANG00000004032 Papio anubis ENSPANG00000004032 I
ENSPFOG00000024243 Poecilia formosa ENSPFOG00000024243 I
ENSPPYG00000008231 Pongo abelii ENSPPYG00000008231 I
ENSPPYG00000020808 Pongo abelii ENSPPYG00000020808 I
ENSSSCG00000012732 Sus scrofa ENSSSCG00000012732 I
ENSSTOG00000020272 Ictidomys tridecemlineatus ENSSTOG00000020272 I
ENSTGUG00000015457 Taeniopygia guttata ENSTGUG00000015457 I
ENSTNIG00000008554 Tetraodon nigroviridis ENSTNIG00000008554 I
ENSTNIG00000016643 Tetraodon nigroviridis ENSTNIG00000016643 N
ENSTNIG00000019152 Tetraodon nigroviridis ENSTNIG00000019152 I
ENSTNIG00000019520 Tetraodon nigroviridis ENSTNIG00000019520 N
ENSTRUG00000004613 Takifugu rubripes ENSTRUG00000004613 I
ENSTRUG00000008763 Takifugu rubripes ENSTRUG00000008763 I
ENSTRUG00000010837 Takifugu rubripes ENSTRUG00000010837 I
ENSTRUG00000012122 Takifugu rubripes ENSTRUG00000012122 I
ENSTRUG00000015486 Takifugu rubripes ENSTRUG00000015486 I
ENSTRUG00000016913 Takifugu rubripes ENSTRUG00000016913 I
ENSTRUG00000017318 Takifugu rubripes ENSTRUG00000017318 I
estExt_fgenesh2_pg.C_500047 Branchiostoma floridae estExt_fgenesh2_pg.C_500047 I
estExt_fgenesh2_pg.C_70302 Branchiostoma floridae estExt_fgenesh2_pg.C_70302 I
fgenesh2_pg.scaffold_142000054 Branchiostoma floridae fgenesh2_pg.scaffold_142000054 I
fgenesh2_pg.scaffold_315000002 Branchiostoma floridae fgenesh2_pg.scaffold_315000002 I
HSF5 Tursiops truncatus ENSTTRG00000006851 I
HSF5 Pan troglodytes ENSPTRG00000009453 I
HSF5 Pteropus vampyrus ENSPVAG00000002322 I
HSF5 Cavia porcellus ENSCPOG00000003431 I
HSF5 Gorilla gorilla ENSGGOG00000013788 I
HSF5 Gallus gallus ENSGALG00000001031 I
HSF5 Echinops telfairi ENSETEG00000014190 I
HSF5 Loxodonta africana ENSLAFG00000029785 I
HSF5 Erinaceus europaeus ENSEEUG00000012375 I
HSF5 Dasypus novemcinctus ENSDNOG00000014871 I
HSF5 Myotis lucifugus ENSMLUG00000006132 I
hsf5 Danio rerio ENSDARG00000104686 I
HSF5 Canis familiaris ENSCAFG00000017528 I
HSF5 Macaca mulatta ENSMMUG00000004184 I
HSF5 Homo sapiens ENSG00000176160 D
Hsf5 Mus musculus ENSMUSG00000070345 I
HSF5 Bos taurus ENSBTAG00000001166 I
HSF5 Oryctolagus cuniculus ENSOCUG00000009733 I
HSF5 Procavia capensis ENSPCAG00000011323 I
HSFX1 Homo sapiens ENSG00000171116 I
HSFX2 Homo sapiens ENSG00000268738 I
HSFY1 Homo sapiens ENSG00000172468 D
HSFY2 Homo sapiens ENSG00000169953 D
Hsfy2 Mus musculus ENSMUSG00000045336 I
Hsfy2 Rattus norvegicus ENSRNOG00000038569 I
maker-pag1_scaffold_1127-snap-gene-0.1 Pythium aphanidermatum maker-pag1_scaffold_1127-snap-gene-0.1 I
Myotis_brandtii_HSFY1_10020625 Myotis brandtii Myotis_brandtii_HSFY1_10020625 I
NEMVEDRAFT_v1g86916 Nematostella vectensis NEMVEDRAFT_v1g86916 I
Pvit_11979 Pogona vitticeps Pvit_11979 I